Detailed information NTG0944150

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: V7A40_RS05275
• Genome accession: NZ_CP146750
• Coordinates: 1070815..1071684 (+)
• Length: 289 a.a.
• NCBI ID: WP_023888985.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain L2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1065815..1076684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V7A40_RS05255 (V7A40_05255)	-	1066144..1066764 (+)	621	WP_014024781.1	GntR family transcriptional regulator	-
V7A40_RS05260 (V7A40_05260)	-	1066969..1068171 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
V7A40_RS05265 (V7A40_05265)	-	1068164..1069888 (+)	1725	WP_004257235.1	ABC transporter permease/substrate binding protein	-
V7A40_RS05270 (V7A40_05270)	budA	1070030..1070728 (+)	699	WP_004257238.1	acetolactate decarboxylase	-
V7A40_RS05275 (V7A40_05275)	dprA	1070815..1071684 (+)	870	WP_023888985.1	DNA-processing protein DprA	Machinery gene
V7A40_RS05280 (V7A40_05280)	topA	1071873..1074023 (+)	2151	WP_341785250.1	type I DNA topoisomerase	-
V7A40_RS05285 (V7A40_05285)	trmFO	1074068..1075411 (+)	1344	WP_014024777.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
V7A40_RS05290 (V7A40_05290)	-	1075484..1075705 (-)	222	WP_014024776.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32887.06 Da
• Isoelectric Point: 9.5626

>NTDB_id=944150 V7A40_RS05275 WP_023888985.1 1070815..1071684(+) (dprA) [Lactococcus garvieae strain L2]
MIRNFEILRLKKAGMSNLGILKLIDYQERHEAKLTLRQLARIAEVKAVPNFIESYKSQDVKRLREQYKTFPSFSILDDIY
PEWLKEMYNPPTLLFYQGNLKLLNFPKLGFVGSREMSKEAPKITYKLIEELKQNFVIVSGLARGVDTSSHVAAIKQQTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLVGEPPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLITHGQDILDEFYLYEGNFLP

Nucleotide

• Length: 870 bp

>NTDB_id=944150 V7A40_RS05275 WP_023888985.1 1070815..1071684(+) (dprA) [Lactococcus garvieae strain L2]
ATGATTAGAAATTTTGAAATATTGCGTTTGAAAAAAGCAGGAATGTCGAATCTAGGGATTTTGAAACTGATTGACTATCA
AGAGAGGCATGAAGCAAAACTTACTTTACGACAGTTAGCGAGGATCGCAGAAGTCAAAGCTGTCCCTAATTTTATTGAGA
GTTACAAGAGTCAGGATGTGAAACGACTTCGAGAGCAATATAAGACCTTCCCCTCCTTTTCCATCTTAGACGACATTTAT
CCTGAATGGCTGAAAGAAATGTATAATCCCCCGACTCTCCTTTTTTATCAAGGAAATCTTAAGTTGCTTAATTTCCCTAA
ACTCGGATTTGTCGGGAGCCGTGAAATGTCTAAGGAAGCACCTAAAATTACATACAAACTTATTGAGGAATTAAAACAAA
ACTTTGTTATAGTGAGCGGGTTAGCACGCGGTGTTGACACTTCTAGTCATGTAGCTGCTATAAAGCAACAAACACCAACC
ATTGCTGTCATTGGTAACGGTTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAGTATTTAGCCACTCATGA
ATTGGTTTTATCAGAATACCTTGTAGGAGAGCCTCCCCTTAAGTTTCATTTTCCAGAGAGAAATAGAATCATTGCGGGTC
TTTCTCGTGGAATTGTCGTTGTTGAAGCAAAGCAACGTAGCGGTAGCCTCATCACAAGTCGTTATGCCTTAGAGGGAAAT
AGAGAAGTATTTGCTGTACCTGGAGATATTTTGAACAGAAATGCCTCTGGCTGTAATCAATTAATCCAGCAAGGTGCAGC
CAAGCTTATCACTCATGGTCAAGATATTTTGGATGAATTTTATTTATATGAGGGTAATTTCCTTCCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (74-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	56.318	95.848	0.54
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae D39	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae R6	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus mitis SK321	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.405	96.54	0.516
dprA	Haemophilus influenzae Rd KW20	37.329	100	0.377