Detailed information NTG0943929

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: V7A38_RS05595
• Genome accession: NZ_CP146739
• Coordinates: 1110753..1111622 (+)
• Length: 289 a.a.
• NCBI ID: WP_023888985.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain L7
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1105753..1116622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V7A38_RS05575 (V7A38_05575)	-	1106082..1106702 (+)	621	WP_014024781.1	GntR family transcriptional regulator	-
V7A38_RS05580 (V7A38_05580)	-	1106907..1108109 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
V7A38_RS05585 (V7A38_05585)	-	1108102..1109826 (+)	1725	WP_004257235.1	ABC transporter permease/substrate binding protein	-
V7A38_RS05590 (V7A38_05590)	budA	1109968..1110666 (+)	699	WP_004257238.1	acetolactate decarboxylase	-
V7A38_RS05595 (V7A38_05595)	dprA	1110753..1111622 (+)	870	WP_023888985.1	DNA-processing protein DprA	Machinery gene
V7A38_RS05600 (V7A38_05600)	topA	1111811..1113961 (+)	2151	WP_341784770.1	type I DNA topoisomerase	-
V7A38_RS05605 (V7A38_05605)	trmFO	1114006..1115349 (+)	1344	WP_341784550.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
V7A38_RS05610 (V7A38_05610)	-	1115422..1115643 (-)	222	WP_014024776.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32887.06 Da
• Isoelectric Point: 9.5626

>NTDB_id=943929 V7A38_RS05595 WP_023888985.1 1110753..1111622(+) (dprA) [Lactococcus garvieae strain L7]
MIRNFEILRLKKAGMSNLGILKLIDYQERHEAKLTLRQLARIAEVKAVPNFIESYKSQDVKRLREQYKTFPSFSILDDIY
PEWLKEMYNPPTLLFYQGNLKLLNFPKLGFVGSREMSKEAPKITYKLIEELKQNFVIVSGLARGVDTSSHVAAIKQQTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLVGEPPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLITHGQDILDEFYLYEGNFLP

Nucleotide

• Length: 870 bp

>NTDB_id=943929 V7A38_RS05595 WP_023888985.1 1110753..1111622(+) (dprA) [Lactococcus garvieae strain L7]
ATGATTAGAAATTTTGAAATATTGCGTTTGAAAAAAGCAGGAATGTCGAATCTAGGGATTTTGAAACTGATTGACTATCA
AGAGAGGCATGAAGCAAAACTTACTTTACGACAGTTAGCGAGGATCGCAGAAGTCAAAGCTGTCCCTAATTTTATTGAGA
GTTACAAGAGTCAGGATGTGAAACGACTTCGAGAGCAATATAAGACCTTCCCCTCCTTTTCCATCTTAGACGACATTTAT
CCTGAATGGCTGAAAGAAATGTATAATCCCCCGACTCTCCTTTTTTATCAAGGAAATCTTAAGTTGCTTAATTTCCCTAA
ACTCGGATTTGTCGGGAGCCGTGAAATGTCTAAGGAAGCACCTAAAATTACATACAAACTTATTGAGGAATTAAAACAAA
ACTTTGTTATAGTGAGCGGGTTAGCACGCGGTGTTGACACTTCTAGTCATGTAGCTGCTATAAAGCAACAAACACCAACC
ATTGCTGTCATTGGTAACGGTTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAGTATTTAGCCACTCATGA
ATTGGTTTTATCAGAATACCTTGTAGGAGAGCCTCCCCTTAAGTTTCATTTTCCAGAGAGAAATAGAATCATTGCGGGTC
TTTCTCGTGGAATTGTCGTTGTTGAAGCAAAGCAACGTAGCGGTAGCCTCATCACAAGTCGTTATGCCTTAGAGGGAAAT
AGAGAAGTATTTGCTGTACCTGGAGATATTTTGAACAGAAATGCCTCTGGCTGTAATCAATTAATCCAGCAAGGTGCAGC
CAAGCTTATCACTCATGGTCAAGATATTTTGGATGAATTTTATTTATATGAGGGTAATTTCCTTCCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (74-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	56.318	95.848	0.54
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae D39	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae R6	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus mitis SK321	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.405	96.54	0.516
dprA	Haemophilus influenzae Rd KW20	37.329	100	0.377