Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   V6U67_RS09970 Genome accession   NZ_CP145865
Coordinates   2126052..2127287 (+) Length   411 a.a.
NCBI ID   WP_037611167.1    Uniprot ID   A0AB33ZFB7
Organism   Streptococcus salivarius strain KSS8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2121052..2132287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS09940 (V6U67_09940) - 2121525..2124119 (+) 2595 WP_037611165.1 YfhO family protein -
  V6U67_RS09960 (V6U67_09960) - 2124668..2125351 (-) 684 WP_002883977.1 YoaK family protein -
  V6U67_RS09965 (V6U67_09965) rlmH 2125367..2125846 (-) 480 WP_022495861.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6U67_RS09970 (V6U67_09970) htrA 2126052..2127287 (+) 1236 WP_037611167.1 S1C family serine protease Regulator
  V6U67_RS09975 (V6U67_09975) spo0J 2127353..2128120 (+) 768 WP_013991348.1 ParB/RepB/Spo0J family partition protein Regulator
  V6U67_RS09980 (V6U67_09980) dnaA 2128359..2129723 (+) 1365 WP_037611169.1 chromosomal replication initiator protein DnaA -

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42958.12 Da        Isoelectric Point: 4.6266

>NTDB_id=940682 V6U67_RS09970 WP_037611167.1 2126052..2127287(+) (htrA) [Streptococcus salivarius strain KSS8]
MKKFNWKKIVAPIAMLVIGLLGGLLGAFILLTAAGVSFTNSTDTGVKTAKTVYNNTTDTTKAVKKVQNAVVSVINYQEGS
SSDSLNELYGRIFGGDDSSDSNQDKSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKIKTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTVTMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISMADLNSLS
SSATSKLDLPDDVKSGVVVGSVQKGMPADGKLQENDVITEIDGKEISSKTDIQTNLYSHSIGDTIKVTFYRGKEKKTEEL
KLTKSTEDLSD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=940682 V6U67_RS09970 WP_037611167.1 2126052..2127287(+) (htrA) [Streptococcus salivarius strain KSS8]
GTGAAAAAATTTAACTGGAAAAAAATAGTAGCGCCAATTGCAATGCTTGTTATTGGCTTGCTAGGTGGTTTGCTAGGTGC
CTTTATCCTACTAACAGCAGCAGGGGTATCTTTTACCAATTCAACAGATACAGGTGTTAAAACAGCTAAGACCGTATACA
ATAATACAACAGATACAACTAAAGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTACCAAGAAGGGTCA
TCTTCAGATTCTCTAAATGAACTTTATGGCCGTATCTTTGGTGGAGATGATAGTTCTGACTCTAACCAAGACAAATCAAA
AGATTCTGATGGGTTGCAAGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGGAAAGAGGCCTACATCGTAA
CCAACAACCACGTTGTCGATGGCGCTAAAAAACTTGAAATCATGCTTTCAGATGGATCAAAAATTACTGGTGAACTCGTT
GGTAAAGATACTTACTCTGACCTAGCAGTTGTCAAAGTTTCTTCAGATAAAATTAAAACCGTAGCGGAATTTGCAGACTC
AAACTCTCTCACAGTCGGTGAGAAGGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAGG
GAATCGTTTCTAGCCTTAGCCGTACCGTAACTATGCAAAACGACAATGGTGAAACTGTTTCAACAAATGCTATCCAAACG
GATGCTGCCATTAACCCTGGTAACTCAGGTGGTGCCTTAGTCAATATCGAAGGACAAGTTATCGGTATTAACTCAAGTAA
AATTTCATCAACGTCAGCAGTCGCTGGTAGCGCCGTTGAAGGTATGGGATTTGCCATTCCATCAAACGATGTTGTCGAGA
TTATCAATCAATTGGAAAAAGACGGTAAAGTTACACGACCAGCCCTAGGAATCTCAATGGCCGATCTTAATAGCCTTTCT
AGCAGTGCAACTTCTAAATTAGATTTACCAGATGATGTGAAATCTGGAGTGGTAGTCGGCAGCGTTCAAAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAAAATGATGTTATCACTGAAATTGACGGTAAGGAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATCGGAGATACAATCAAGGTAACCTTCTATCGTGGTAAAGAGAAGAAAACTGAAGAACTT
AAATTAACAAAATCTACAGAAGACTTGTCTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.787

98.054

0.606

  htrA Streptococcus gordonii str. Challis substr. CH1

57.635

98.783

0.569

  htrA Streptococcus pneumoniae Rx1

54.523

99.513

0.543

  htrA Streptococcus pneumoniae R6

54.523

99.513

0.543

  htrA Streptococcus pneumoniae TIGR4

54.523

99.513

0.543

  htrA Streptococcus pneumoniae D39

54.523

99.513

0.543

  htrA Streptococcus mitis NCTC 12261

54.523

99.513

0.543