Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   V6U67_RS09975 Genome accession   NZ_CP145865
Coordinates   2127353..2128120 (+) Length   255 a.a.
NCBI ID   WP_013991348.1    Uniprot ID   A0AB33ZDS6
Organism   Streptococcus salivarius strain KSS8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2122353..2133120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS09960 (V6U67_09960) - 2124668..2125351 (-) 684 WP_002883977.1 YoaK family protein -
  V6U67_RS09965 (V6U67_09965) rlmH 2125367..2125846 (-) 480 WP_022495861.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6U67_RS09970 (V6U67_09970) htrA 2126052..2127287 (+) 1236 WP_037611167.1 S1C family serine protease Regulator
  V6U67_RS09975 (V6U67_09975) spo0J 2127353..2128120 (+) 768 WP_013991348.1 ParB/RepB/Spo0J family partition protein Regulator
  V6U67_RS09980 (V6U67_09980) dnaA 2128359..2129723 (+) 1365 WP_037611169.1 chromosomal replication initiator protein DnaA -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29363.86 Da        Isoelectric Point: 9.5843

>NTDB_id=940683 V6U67_RS09975 WP_013991348.1 2127353..2128120(+) (spo0J) [Streptococcus salivarius strain KSS8]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=940683 V6U67_RS09975 WP_013991348.1 2127353..2128120(+) (spo0J) [Streptococcus salivarius strain KSS8]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTAATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAAAGCCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGGAAATCCAGACCTT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCAAAGAGATACAGACGAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAATTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
AGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTGGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

100

0.576