Detailed information NTG0940671

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: V6U67_RS09105
• Genome accession: NZ_CP145865
• Coordinates: 1971862..1972254 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: A0AB33ZFB8
• Organism: Streptococcus salivarius strain KSS8
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1966862..1977254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U67_RS09065 (V6U67_09070)	dapD	1966942..1967640 (-)	699	WP_022496726.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
V6U67_RS09070 (V6U67_09075)	-	1967726..1968478 (-)	753	WP_037611112.1	HAD family hydrolase	-
V6U67_RS09075 (V6U67_09080)	-	1968591..1969430 (-)	840	WP_037611111.1	putative RNA methyltransferase	-
V6U67_RS09085 (V6U67_09090)	-	1969852..1970010 (+)	159	WP_037611110.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
V6U67_RS09090 (V6U67_09095)	-	1970031..1970198 (+)	168	WP_037611109.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
V6U67_RS09095 (V6U67_09100)	-	1970246..1970497 (+)	252	WP_014635104.1	hypothetical protein	-
V6U67_RS09100 (V6U67_09105)	tadA	1970584..1971102 (-)	519	WP_037611108.1	tRNA adenosine(34) deaminase TadA	-
V6U67_RS09105 (V6U67_09110)	ssbA	1971862..1972254 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
V6U67_RS09110 (V6U67_09115)	-	1972684..1973362 (-)	679	Protein_1737	CPBP family intramembrane glutamic endopeptidase	-
V6U67_RS09115 (V6U67_09120)	ytpR	1973628..1974251 (-)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
V6U67_RS09120 (V6U67_09125)	-	1974283..1974807 (-)	525	WP_022496105.1	hypothetical protein	-
V6U67_RS09125 (V6U67_09130)	-	1974811..1975125 (-)	315	WP_002887006.1	thioredoxin family protein	-
V6U67_RS09130 (V6U67_09135)	-	1975122..1975406 (-)	285	WP_002885838.1	DUF4651 domain-containing protein	-
V6U67_RS09135 (V6U67_09140)	pepA	1975506..1976573 (+)	1068	WP_021152626.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=940671 V6U67_RS09105 WP_002885697.1 1971862..1972254(-) (ssbA) [Streptococcus salivarius strain KSS8]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=940671 V6U67_RS09105 WP_002885697.1 1971862..1972254(-) (ssbA) [Streptococcus salivarius strain KSS8]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGTGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGGGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTCAAACCCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTTTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385