Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   V6U66_RS10635 Genome accession   NZ_CP145864
Coordinates   2242055..2243290 (+) Length   411 a.a.
NCBI ID   WP_013991347.1    Uniprot ID   A0AB37CMH1
Organism   Streptococcus salivarius strain KSS7     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2237055..2248290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS10615 (V6U66_10595) - 2239378..2240397 (-) 1020 WP_171021848.1 IS30-like element IS1139 family transposase -
  V6U66_RS10625 (V6U66_10605) - 2240671..2241354 (-) 684 WP_013991345.1 YoaK family protein -
  V6U66_RS10630 (V6U66_10610) rlmH 2241370..2241849 (-) 480 WP_014632473.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6U66_RS10635 (V6U66_10615) htrA 2242055..2243290 (+) 1236 WP_013991347.1 S1C family serine protease Regulator
  V6U66_RS10640 (V6U66_10620) spo0J 2243356..2244123 (+) 768 WP_013991348.1 ParB/RepB/Spo0J family partition protein Regulator
  V6U66_RS10645 (V6U66_10625) dnaA 2244362..2245726 (+) 1365 WP_013989871.1 chromosomal replication initiator protein DnaA -

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42915.09 Da        Isoelectric Point: 4.6266

>NTDB_id=940615 V6U66_RS10635 WP_013991347.1 2242055..2243290(+) (htrA) [Streptococcus salivarius strain KSS7]
MKKFNWKKIVAPIAMLVIGLLGGLLGAFILLTAAGVSFTNSTDTGVKTAKTVYNNTTDTTKAVKKVQNAVVSVINYQEGS
SSDSLNELYGRIFGGDDSSDSSQDKSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKIKTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTVTMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISMADLNSLS
SSATSKLDLPDDVKAGVVVGSVQKGMPADGKLQENDVITEIDGKEISSKTDIQTNLYSHSIGDTIKVTFYRGKEKKTEEL
KLTKSTEDLSD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=940615 V6U66_RS10635 WP_013991347.1 2242055..2243290(+) (htrA) [Streptococcus salivarius strain KSS7]
GTGAAAAAATTTAACTGGAAAAAAATAGTAGCGCCAATTGCAATGCTTGTTATTGGCTTGCTCGGTGGTTTGCTAGGTGC
CTTTATCCTACTAACAGCAGCAGGGGTATCTTTTACCAATTCAACAGATACAGGTGTTAAAACAGCTAAGACCGTATACA
ATAATACAACAGATACAACTAAAGCTGTTAAGAAAGTACAAAATGCTGTTGTTTCTGTCATCAATTACCAAGAAGGGTCA
TCTTCAGATTCTCTAAATGAACTTTATGGCCGTATCTTTGGTGGAGATGATAGTTCTGACTCTAGCCAAGACAAATCAAA
AGATTCTGATGGGTTACAAGTCGCTGGTGAAGGTTCCGGTGTTATCTATAAAAAGGATGGTAAAGAGGCTTATATCGTAA
CCAACAACCACGTTGTCGATGGCGCTAAAAAACTTGAAATCATGCTTTCAGATGGATCAAAAATTACTGGTGAACTCGTT
GGTAAAGATACTTACTCTGACCTAGCAGTTGTCAAAGTTTCTTCAGATAAAATTAAAACCGTAGCGGAATTTGCAGACTC
AAACTCTCTCACAGTCGGTGAGAAGGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAGG
GAATCGTTTCTAGCCTTAGCCGTACCGTAACTATGCAAAACGACAATGGTGAAACTGTTTCAACAAATGCTATTCAAACA
GATGCTGCCATTAACCCTGGTAACTCAGGTGGTGCCTTAGTCAATATCGAAGGACAAGTTATCGGTATTAACTCAAGTAA
AATTTCATCAACGTCAGCAGTCGCTGGTAGCGCCGTTGAAGGTATGGGATTTGCCATTCCATCAAACGATGTTGTCGAAA
TCATCAATCAATTGGAAAAAGACGGTAAAGTTACACGACCAGCCCTAGGAATCTCAATGGCCGATCTTAACAGCCTTTCT
AGCAGTGCAACTTCTAAATTAGATTTACCAGATGATGTGAAAGCTGGAGTTGTAGTCGGCAGCGTTCAAAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAAAATGATGTTATCACTGAAATTGACGGTAAGGAAATCAGCTCAAAAACTGATATTCAAA
CCAACCTTTACAGCCATAGTATCGGAGATACAATCAAGGTAACCTTCTATCGTGGTAAAGAGAAGAAAACTGAAGAACTT
AAATTAACAAAATCTACAGAAGACTTGTCTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.787

98.054

0.606

  htrA Streptococcus gordonii str. Challis substr. CH1

57.389

98.783

0.567

  htrA Streptococcus pneumoniae Rx1

54.279

99.513

0.54

  htrA Streptococcus pneumoniae R6

54.279

99.513

0.54

  htrA Streptococcus pneumoniae TIGR4

54.279

99.513

0.54

  htrA Streptococcus pneumoniae D39

54.279

99.513

0.54

  htrA Streptococcus mitis NCTC 12261

54.279

99.513

0.54