Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   V6U66_RS10640 Genome accession   NZ_CP145864
Coordinates   2243356..2244123 (+) Length   255 a.a.
NCBI ID   WP_013991348.1    Uniprot ID   A0AB33ZDS6
Organism   Streptococcus salivarius strain KSS7     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2238356..2249123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS10615 (V6U66_10595) - 2239378..2240397 (-) 1020 WP_171021848.1 IS30-like element IS1139 family transposase -
  V6U66_RS10625 (V6U66_10605) - 2240671..2241354 (-) 684 WP_013991345.1 YoaK family protein -
  V6U66_RS10630 (V6U66_10610) rlmH 2241370..2241849 (-) 480 WP_014632473.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6U66_RS10635 (V6U66_10615) htrA 2242055..2243290 (+) 1236 WP_013991347.1 S1C family serine protease Regulator
  V6U66_RS10640 (V6U66_10620) spo0J 2243356..2244123 (+) 768 WP_013991348.1 ParB/RepB/Spo0J family partition protein Regulator
  V6U66_RS10645 (V6U66_10625) dnaA 2244362..2245726 (+) 1365 WP_013989871.1 chromosomal replication initiator protein DnaA -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29363.86 Da        Isoelectric Point: 9.5843

>NTDB_id=940616 V6U66_RS10640 WP_013991348.1 2243356..2244123(+) (spo0J) [Streptococcus salivarius strain KSS7]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=940616 V6U66_RS10640 WP_013991348.1 2243356..2244123(+) (spo0J) [Streptococcus salivarius strain KSS7]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTAATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGGAAATCCAGACCCT
ATATCAGTAACGCTCTTAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAACTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
TGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

100

0.576