Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   V6U65_RS10175 Genome accession   NZ_CP145863
Coordinates   2173773..2175008 (+) Length   411 a.a.
NCBI ID   WP_070439652.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2168773..2180008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U65_RS10145 (V6U65_10140) - 2169245..2171839 (+) 2595 WP_410532473.1 YfhO family protein -
  V6U65_RS10165 (V6U65_10160) - 2172389..2173072 (-) 684 WP_002883977.1 YoaK family protein -
  V6U65_RS10170 (V6U65_10165) rlmH 2173088..2173567 (-) 480 WP_014632473.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6U65_RS10175 (V6U65_10170) htrA 2173773..2175008 (+) 1236 WP_070439652.1 S1C family serine protease Regulator
  V6U65_RS10180 (V6U65_10175) spo0J 2175074..2175841 (+) 768 WP_014635206.1 ParB/RepB/Spo0J family partition protein Regulator
  V6U65_RS10185 (V6U65_10180) dnaA 2176080..2177444 (+) 1365 WP_049553505.1 chromosomal replication initiator protein DnaA -

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42888.06 Da        Isoelectric Point: 4.6266

>NTDB_id=940544 V6U65_RS10175 WP_070439652.1 2173773..2175008(+) (htrA) [Streptococcus salivarius strain KSS6]
MKKFNWKKIVAPIAMLVIGLLGGLLGAFILLTAAGVSFTNSTDTGVKTAKTVYSNTTDTTKAVKKVQNAVVSVINYQEGS
SSDSLNELYGRIFGGDDSSDSSQDKSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKIKTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTVTMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISMADLNSLS
SSATSKLDLPDDVKAGVVVGSVQKGMPADGKLQENDVITEIDGKEISSKTDIQTNLYSHSIGDTIKVTFYRGKEKKTEEL
KLTKSTEDLSD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=940544 V6U65_RS10175 WP_070439652.1 2173773..2175008(+) (htrA) [Streptococcus salivarius strain KSS6]
GTGAAAAAATTTAACTGGAAAAAAATAGTAGCGCCAATTGCAATGCTTGTTATTGGCTTACTAGGTGGTTTACTAGGTGC
CTTTATCCTACTAACAGCAGCAGGGGTATCTTTTACCAATTCAACCGATACAGGTGTTAAAACAGCTAAGACCGTATACA
GTAATACAACAGATACAACTAAAGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTACCAAGAAGGGTCA
TCTTCAGATTCTCTAAATGAACTTTATGGCCGTATCTTTGGTGGAGATGATAGTTCTGATTCTAGCCAAGACAAATCAAA
AGATTCTGATGGGTTGCAAGTCGCTGGTGAAGGTTCCGGTGTCATCTATAAAAAGGATGGTAAAGAGGCTTATATCGTAA
CCAACAACCACGTTGTCGATGGCGCTAAAAAACTTGAAATCATGCTTTCAGATGGATCAAAAATTACTGGTGAACTCGTT
GGTAAAGATACTTACTCTGACCTAGCAGTTGTCAAAGTTTCTTCAGATAAAATTAAAACCGTAGCAGAATTTGCAGACTC
AAACTCTCTCACAGTCGGTGAGAAGGCAATTGCTATCGGTAGCCCACTTGGTACCGAATATGCCAACTCAGTAACAGAGG
GAATCGTTTCTAGCCTTAGCCGTACCGTAACTATGCAAAACGACAATGGTGAAACTGTTTCAACAAATGCTATCCAAACA
GATGCTGCCATTAACCCTGGTAACTCAGGTGGTGCCTTAGTCAATATCGAAGGTCAAGTTATCGGTATTAACTCAAGTAA
AATTTCATCAACGTCAGCAGTCGCTGGTAGCGCCGTTGAAGGTATGGGATTTGCCATTCCATCAAACGATGTTGTCGAAA
TCATCAATCAATTGGAAAAAGACGGTAAAGTTACACGACCAGCCCTAGGAATCTCAATGGCCGATCTTAATAGCCTTTCT
AGCAGTGCAACTTCTAAATTAGATTTACCAGATGATGTGAAAGCTGGAGTTGTAGTCGGCAGCGTTCAAAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAAAATGATGTTATCACTGAAATTGACGGTAAGGAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATTGGAGATACAATCAAGGTAACCTTCTATCGTGGTAAAGAGAAGAAAACTGAAGAACTT
AAATTAACAAAATCTACAGAAGACTTGTCTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.787

98.054

0.606

  htrA Streptococcus gordonii str. Challis substr. CH1

57.389

98.783

0.567

  htrA Streptococcus pneumoniae Rx1

54.279

99.513

0.54

  htrA Streptococcus pneumoniae R6

54.279

99.513

0.54

  htrA Streptococcus pneumoniae TIGR4

54.279

99.513

0.54

  htrA Streptococcus pneumoniae D39

54.279

99.513

0.54

  htrA Streptococcus mitis NCTC 12261

54.279

99.513

0.54