Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   V6U65_RS10180 Genome accession   NZ_CP145863
Coordinates   2175074..2175841 (+) Length   255 a.a.
NCBI ID   WP_014635206.1    Uniprot ID   A0A1F2H938
Organism   Streptococcus salivarius strain KSS6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2170074..2180841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U65_RS10165 (V6U65_10160) - 2172389..2173072 (-) 684 WP_002883977.1 YoaK family protein -
  V6U65_RS10170 (V6U65_10165) rlmH 2173088..2173567 (-) 480 WP_014632473.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6U65_RS10175 (V6U65_10170) htrA 2173773..2175008 (+) 1236 WP_070439652.1 S1C family serine protease Regulator
  V6U65_RS10180 (V6U65_10175) spo0J 2175074..2175841 (+) 768 WP_014635206.1 ParB/RepB/Spo0J family partition protein Regulator
  V6U65_RS10185 (V6U65_10180) dnaA 2176080..2177444 (+) 1365 WP_049553505.1 chromosomal replication initiator protein DnaA -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29363.81 Da        Isoelectric Point: 9.4081

>NTDB_id=940545 V6U65_RS10180 WP_014635206.1 2175074..2175841(+) (spo0J) [Streptococcus salivarius strain KSS6]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPQEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=940545 V6U65_RS10180 WP_014635206.1 2175074..2175841(+) (spo0J) [Streptococcus salivarius strain KSS6]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTAATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGGAAATCCAGACCTT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCCAAGAGATACAGACGAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAATTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
AGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTGGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F2H938

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

100

0.576