Detailed information NTG0932615

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: VX159_RS07885
• Genome accession: NZ_CP144212
• Coordinates: 1718183..1719388 (-)
• Length: 401 a.a.
• NCBI ID: WP_371325424.1
• Uniprot ID: -
• Organism: Dechloromonas sp. ZY10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1713183..1724388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VX159_RS07865 (VX159_07850)	guaB	1713219..1714682 (+)	1464	WP_371325420.1	IMP dehydrogenase	-
VX159_RS07870 (VX159_07855)	guaA	1714758..1716392 (+)	1635	WP_371325421.1	glutamine-hydrolyzing GMP synthase	-
VX159_RS07875 (VX159_07860)	-	1716742..1717095 (-)	354	WP_371325422.1	CZB domain-containing protein	-
VX159_RS07880 (VX159_07865)	-	1717110..1718186 (+)	1077	WP_371325423.1	RsmB/NOP family class I SAM-dependent RNA methyltransferase	-
VX159_RS07885 (VX159_07870)	pilU	1718183..1719388 (-)	1206	WP_371325424.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
VX159_RS07890 (VX159_07875)	-	1719610..1719780 (-)	171	WP_371325425.1	hypothetical protein	-
VX159_RS07895 (VX159_07880)	-	1720125..1721999 (+)	1875	WP_371325426.1	SurA N-terminal domain-containing protein	-
VX159_RS07900 (VX159_07885)	fabI	1722222..1723019 (-)	798	WP_371325427.1	enoyl-ACP reductase FabI	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 44047.27 Da
• Isoelectric Point: 6.2753

>NTDB_id=932615 VX159_RS07885 WP_371325424.1 1718183..1719388(-) (pilU) [Dechloromonas sp. ZY10]
MSAEDTPGDELKNYIHALLKAMVQHGGSDLFIAKDFAPTMKVHGTMKALSSQKLTPDIARKLAQALMNPTQREEFEREHE
CNFAISLPGISRFRVNVFLQQQTVAMVIRTITSEIPNLEKLGLPEVLKEIITTKRGLILVVGGTGSGKSTTMAAMLDHRN
ATAPGHIITVEDPVEYVHTSKQCLVTHREVGVDTHSWHNALKNTLRQAPDVILIGEIRDLETMEHALAFAETGHLCMGTL
HANNANQTLDRVVNFFPDERKAQVLMDIASNLKAVVSQRLIRTIDGKRKPAIEILLNTPTVAELLSKGQSAAIKPVMDKS
RELGMQTFDQALFDLYDAGHIAYDEAIRNADSANELRLAIKLKSKRGEPANSSGFSLSIEEEKKDEDEDAGEGSSPAPTS
T

Nucleotide

• Length: 1206 bp

>NTDB_id=932615 VX159_RS07885 WP_371325424.1 1718183..1719388(-) (pilU) [Dechloromonas sp. ZY10]
ATGAGCGCGGAAGACACCCCCGGCGACGAACTCAAGAACTATATCCACGCACTGCTGAAAGCAATGGTTCAGCACGGCGG
CTCGGATCTGTTCATTGCCAAGGATTTTGCACCGACCATGAAAGTCCACGGGACGATGAAGGCGCTGTCATCGCAAAAGC
TGACCCCGGACATTGCCCGCAAATTGGCGCAAGCCCTGATGAACCCAACCCAGCGCGAGGAGTTTGAACGAGAACACGAA
TGCAATTTTGCAATTTCACTACCGGGCATTTCTCGCTTCCGGGTCAATGTCTTCCTGCAACAGCAAACGGTGGCCATGGT
CATCCGGACGATTACCAGCGAAATCCCCAATCTCGAAAAGCTTGGCCTACCCGAAGTCCTCAAAGAAATCATCACCACCA
AACGCGGGCTGATTCTGGTCGTTGGCGGCACAGGCTCAGGCAAATCGACGACCATGGCGGCCATGCTTGACCACCGCAAC
GCGACCGCCCCGGGACACATCATTACTGTCGAAGATCCGGTCGAATACGTGCATACCTCGAAACAATGCCTGGTCACTCA
CCGCGAAGTCGGGGTCGACACCCACTCCTGGCACAACGCCCTGAAAAACACGCTGCGACAGGCGCCGGATGTGATCCTGA
TCGGGGAAATCCGCGATCTCGAAACCATGGAACATGCACTGGCCTTTGCCGAGACCGGCCACCTGTGCATGGGAACCCTG
CATGCCAACAACGCAAACCAGACGCTGGACCGGGTCGTCAATTTCTTCCCCGACGAACGAAAAGCCCAGGTGCTGATGGA
TATAGCCTCGAATTTGAAGGCGGTGGTTTCACAGCGACTGATCCGGACGATCGACGGCAAACGTAAGCCAGCCATCGAAA
TTCTGCTCAACACGCCAACCGTGGCCGAACTGCTATCCAAAGGACAGTCGGCGGCAATCAAGCCGGTGATGGACAAGAGC
CGCGAACTCGGCATGCAGACCTTCGATCAAGCCCTGTTCGACCTCTACGATGCAGGTCACATCGCCTACGACGAAGCCAT
CCGCAACGCCGATTCGGCCAATGAACTGCGCCTCGCGATCAAGCTCAAGAGCAAACGTGGCGAACCAGCCAATAGCAGCG
GCTTTTCACTGTCGATCGAGGAAGAGAAAAAAGACGAGGACGAAGACGCCGGCGAAGGTAGCTCCCCTGCCCCCACCAGC
ACCTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (21-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	54.595	92.269	0.504
pilU	Acinetobacter baylyi ADP1	52.101	89.027	0.464
pilU	Vibrio cholerae strain A1552	49.319	91.521	0.451
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.363	86.534	0.367
pilT	Pseudomonas aeruginosa PAK	43.976	82.793	0.364
pilT	Pseudomonas stutzeri DSM 10701	43.155	83.791	0.362