Detailed information NTG0930219

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: U4D55_RS09220
• Genome accession: NZ_CP143641
• Coordinates: 1889652..1890518 (-)
• Length: 288 a.a.
• NCBI ID: WP_011275951.1
• Uniprot ID: -
• Organism: Staphylococcus haemolyticus strain M62.3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1884652..1895518

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U4D55_RS09205 (U4D55_09205)	xerC	1885035..1885898 (-)	864	WP_392390667.1	tyrosine recombinase XerC	-
U4D55_RS09210 (U4D55_09210)	trmFO	1886073..1887380 (-)	1308	WP_011275949.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
U4D55_RS09215 (U4D55_09215)	topA	1887404..1889473 (-)	2070	WP_011275950.1	type I DNA topoisomerase	-
U4D55_RS09220 (U4D55_09220)	dprA	1889652..1890518 (-)	867	WP_011275951.1	DNA-processing protein DprA	Machinery gene
U4D55_RS09225 (U4D55_09225)	-	1890737..1891966 (-)	1230	WP_011275952.1	aminoacyltransferase	-
U4D55_RS09230 (U4D55_09230)	sucD	1892266..1893171 (-)	906	WP_316083015.1	succinate--CoA ligase subunit alpha	-
U4D55_RS09235 (U4D55_09235)	sucC	1893193..1894359 (-)	1167	WP_011275954.1	ADP-forming succinate--CoA ligase subunit beta	-
U4D55_RS09240 (U4D55_09240)	-	1894471..1895238 (-)	768	WP_011275955.1	ribonuclease HII	-

Sequence

Protein

• Length: 288 a.a.
• Molecular weight: 33058.12 Da
• Isoelectric Point: 9.4081

>NTDB_id=930219 U4D55_RS09220 WP_011275951.1 1889652..1890518(-) (dprA) [Staphylococcus haemolyticus strain M62.3]
MTNNNILLLKLIWLGYTTQHIHHLLKLNPEFFKFSYTDQIDSIKNWDKLFHKGDFIDRYNHLNDKEILSFLNQHKISFVT
PFNANYPRLLKEIYDYPFVLFYQGDPQLLTSPNTLGVVGSRNATEYSAKAMQYLFPKFKQIPLTIISGLAKGADSIAHHF
AIEYQLPTIAVLGFGHMMHYPRETQKLRNIIEVKGLVISEYPPFTSVRRYHFPQRNRLISGLSQGVLITEASVRSGSQIT
IDCALDQNRNIYVLPGSIFNPLTKGNLKRAQEGAMIVTSADDILCDYK

Nucleotide

• Length: 867 bp

>NTDB_id=930219 U4D55_RS09220 WP_011275951.1 1889652..1890518(-) (dprA) [Staphylococcus haemolyticus strain M62.3]
ATGACTAACAACAACATATTACTTTTGAAATTAATTTGGTTAGGTTATACGACCCAACATATTCATCATTTATTAAAATT
AAATCCTGAATTTTTTAAATTCTCTTATACTGATCAAATAGATTCAATAAAAAATTGGGACAAGTTATTTCATAAAGGTG
ATTTTATTGATAGATATAATCATTTAAATGATAAAGAAATTTTGTCATTTTTGAATCAACACAAGATAAGTTTTGTAACA
CCGTTTAACGCTAATTATCCTCGACTATTAAAAGAAATTTATGATTATCCGTTTGTCCTATTTTACCAAGGTGACCCCCA
ATTATTAACATCCCCCAATACATTAGGTGTGGTGGGCTCAAGAAATGCAACAGAGTACTCAGCTAAAGCCATGCAATACT
TATTTCCTAAATTTAAACAAATTCCACTAACCATTATTTCCGGTTTGGCAAAAGGTGCTGATAGCATTGCACATCATTTT
GCTATAGAGTATCAATTACCTACTATAGCTGTTTTAGGTTTTGGTCATATGATGCATTACCCTAGAGAAACGCAAAAATT
ACGCAACATAATTGAAGTAAAAGGTTTAGTTATTAGTGAATATCCGCCATTCACTAGTGTTAGGCGATATCACTTTCCGC
AACGCAATCGTTTGATAAGCGGTCTTTCACAAGGGGTTTTAATAACTGAAGCAAGTGTTAGAAGCGGTAGTCAAATTACA
ATTGATTGCGCATTAGACCAAAATAGAAATATATATGTATTACCAGGTTCAATATTTAATCCACTAACTAAAGGTAATTT
GAAACGAGCTCAAGAAGGTGCGATGATTGTAACCTCAGCTGATGATATTCTATGTGATTATAAATAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-278)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Staphylococcus aureus MW2	49.825	98.958	0.493
dprA	Staphylococcus aureus N315	49.825	98.958	0.493
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	36.395	100	0.372
dprA/cilB/dalA	Streptococcus pneumoniae D39	36.395	100	0.372
dprA/cilB/dalA	Streptococcus pneumoniae R6	36.395	100	0.372
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	36.395	100	0.372
dprA	Streptococcus mutans UA159	37.544	98.958	0.372
dprA/cilB/dalA	Streptococcus mitis SK321	35.374	100	0.361
dprA	Legionella pneumophila strain ERS1305867	42.105	85.764	0.361