Detailed information NTG0930188

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: U4D54_RS12380
• Genome accession: NZ_CP143639
• Coordinates: 2523009..2523875 (+)
• Length: 288 a.a.
• NCBI ID: WP_011275951.1
• Uniprot ID: -
• Organism: Staphylococcus haemolyticus strain M81.1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2518009..2528875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U4D54_RS12360 (U4D54_12360)	-	2518289..2519056 (+)	768	WP_033080068.1	ribonuclease HII	-
U4D54_RS12365 (U4D54_12365)	sucC	2519168..2520334 (+)	1167	WP_011275954.1	ADP-forming succinate--CoA ligase subunit beta	-
U4D54_RS12370 (U4D54_12370)	sucD	2520356..2521261 (+)	906	WP_011275953.1	succinate--CoA ligase subunit alpha	-
U4D54_RS12375 (U4D54_12375)	-	2521561..2522790 (+)	1230	WP_011275952.1	aminoacyltransferase	-
U4D54_RS12380 (U4D54_12380)	dprA	2523009..2523875 (+)	867	WP_011275951.1	DNA-processing protein DprA	Machinery gene
U4D54_RS12385 (U4D54_12385)	topA	2524054..2526123 (+)	2070	WP_011275950.1	type I DNA topoisomerase	-
U4D54_RS12390 (U4D54_12390)	trmFO	2526147..2527454 (+)	1308	WP_011275949.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
U4D54_RS12395 (U4D54_12395)	xerC	2527629..2528492 (+)	864	WP_210423028.1	tyrosine recombinase XerC	-

Sequence

Protein

• Length: 288 a.a.
• Molecular weight: 33058.12 Da
• Isoelectric Point: 9.4081

>NTDB_id=930188 U4D54_RS12380 WP_011275951.1 2523009..2523875(+) (dprA) [Staphylococcus haemolyticus strain M81.1]
MTNNNILLLKLIWLGYTTQHIHHLLKLNPEFFKFSYTDQIDSIKNWDKLFHKGDFIDRYNHLNDKEILSFLNQHKISFVT
PFNANYPRLLKEIYDYPFVLFYQGDPQLLTSPNTLGVVGSRNATEYSAKAMQYLFPKFKQIPLTIISGLAKGADSIAHHF
AIEYQLPTIAVLGFGHMMHYPRETQKLRNIIEVKGLVISEYPPFTSVRRYHFPQRNRLISGLSQGVLITEASVRSGSQIT
IDCALDQNRNIYVLPGSIFNPLTKGNLKRAQEGAMIVTSADDILCDYK

Nucleotide

• Length: 867 bp

>NTDB_id=930188 U4D54_RS12380 WP_011275951.1 2523009..2523875(+) (dprA) [Staphylococcus haemolyticus strain M81.1]
ATGACTAACAACAACATATTACTTTTGAAATTAATTTGGTTAGGTTATACGACCCAACATATTCATCATTTATTAAAATT
AAATCCTGAATTTTTTAAATTCTCTTATACTGATCAAATAGATTCAATAAAAAATTGGGACAAGTTATTTCATAAAGGTG
ATTTTATTGATCGATATAATCATTTAAATGATAAAGAAATTTTGTCATTTTTGAATCAACACAAGATAAGTTTTGTAACA
CCGTTTAACGCTAATTATCCTCGACTATTAAAAGAAATTTATGATTATCCGTTTGTCCTATTTTACCAAGGTGACCCCCA
ATTATTAACATCCCCCAATACATTAGGTGTGGTGGGCTCAAGAAATGCAACAGAGTACTCAGCTAAAGCCATGCAATACT
TATTTCCTAAATTTAAACAAATTCCACTAACCATTATTTCCGGTTTGGCAAAAGGTGCTGATAGCATTGCACATCATTTT
GCTATAGAGTATCAATTACCTACTATAGCTGTTTTAGGTTTTGGTCATATGATGCATTACCCTAGAGAAACGCAAAAATT
ACGCAACATAATTGAAGTAAAAGGTTTAGTTATTAGTGAATATCCGCCATTCACTAGTGTTAGGCGATATCACTTTCCGC
AACGCAATCGTTTGATAAGCGGTCTTTCACAAGGGGTTTTAATAACTGAAGCAAGTGTTAGAAGCGGTAGTCAAATTACA
ATTGATTGCGCATTAGACCAAAATAGAAATATATATGTATTACCAGGTTCAATATTTAATCCACTAACTAAAGGTAATTT
GAAACGAGCTCAAGAAGGTGCGATGATTGTAACCTCAGCTGATGATATTCTATGTGATTATAAATAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-278)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Staphylococcus aureus MW2	49.825	98.958	0.493
dprA	Staphylococcus aureus N315	49.825	98.958	0.493
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	36.395	100	0.372
dprA/cilB/dalA	Streptococcus pneumoniae D39	36.395	100	0.372
dprA/cilB/dalA	Streptococcus pneumoniae R6	36.395	100	0.372
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	36.395	100	0.372
dprA	Streptococcus mutans UA159	37.544	98.958	0.372
dprA/cilB/dalA	Streptococcus mitis SK321	35.374	100	0.361
dprA	Legionella pneumophila strain ERS1305867	42.105	85.764	0.361