Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   R8628_RS07090 Genome accession   NZ_AP028335
Coordinates   1354540..1355508 (+) Length   322 a.a.
NCBI ID   WP_002872671.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter jejuni strain BCH-10174     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1349540..1360508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8628_RS07065 (B10174_13940) cdsA 1350449..1351174 (-) 726 WP_002856027.1 phosphatidate cytidylyltransferase -
  R8628_RS07070 (B10174_13950) - 1351183..1351521 (-) 339 WP_002852397.1 hypothetical protein -
  R8628_RS07075 (B10174_13960) - 1351523..1352830 (-) 1308 WP_038816946.1 NFACT RNA binding domain-containing protein -
  R8628_RS07080 (B10174_13970) mobA 1352893..1353468 (+) 576 WP_002853737.1 molybdenum cofactor guanylyltransferase -
  R8628_RS07085 (B10174_13980) pldA 1353465..1354454 (+) 990 WP_038816947.1 phospholipase A -
  R8628_RS07090 (B10174_13990) ceuB 1354540..1355508 (+) 969 WP_002872671.1 ABC transporter permease Machinery gene
  R8628_RS07095 (B10174_14000) ceuC 1355501..1356439 (+) 939 WP_317653331.1 iron chelate uptake ABC transporter family permease subunit -
  R8628_RS07100 (B10174_14010) ceuD 1356436..1357191 (+) 756 WP_002896069.1 ABC transporter ATP-binding protein -
  R8628_RS07105 (B10174_14020) ceuB 1357204..1358196 (+) 993 WP_002867307.1 enterochelin ABC transporter substrate-binding protein CeuB -
  R8628_RS07115 (B10174_14030) - 1358422..1358976 (-) 555 WP_043012925.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=92683 R8628_RS07090 WP_002872671.1 1354540..1355508(+) (ceuB) [Campylobacter jejuni strain BCH-10174]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=92683 R8628_RS07090 WP_002872671.1 1354540..1355508(+) (ceuB) [Campylobacter jejuni strain BCH-10174]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTTACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGGACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTCTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGCATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment