Detailed information NTG0926663

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: VJ143_RS19970
• Genome accession: NZ_CP142740
• Coordinates: 4276608..4277666 (-)
• Length: 352 a.a.
• NCBI ID: WP_004816660.1
• Uniprot ID: A0A077L4V4
• Organism: Acinetobacter guillouiae strain 13-3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4271608..4282666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VJ143_RS19945 (VJ143_19955)	aroK	4271926..4272468 (-)	543	WP_004725433.1	shikimate kinase AroK	-
VJ143_RS19950 (VJ143_19960)	pilQ	4272505..4274676 (-)	2172	WP_151956404.1	type IV pilus secretin PilQ family protein	Machinery gene
VJ143_RS19955 (VJ143_19965)	comL	4274697..4275227 (-)	531	WP_151956403.1	pilus assembly protein PilP	Machinery gene
VJ143_RS19960 (VJ143_19970)	pilO	4275224..4275970 (-)	747	WP_151956402.1	type 4a pilus biogenesis protein PilO	Machinery gene
VJ143_RS19965 (VJ143_19975)	pilN	4275967..4276608 (-)	642	WP_056517486.1	PilN domain-containing protein	Machinery gene
VJ143_RS19970 (VJ143_19980)	comM	4276608..4277666 (-)	1059	WP_004816660.1	pilus assembly protein PilM	Machinery gene
VJ143_RS19975 (VJ143_19985)	ponA	4277830..4280373 (+)	2544	WP_056517488.1	penicillin-binding protein PBP1a	-
VJ143_RS19980 (VJ143_19990)	-	4280434..4281237 (-)	804	WP_056517491.1	putative RNA methyltransferase	-
VJ143_RS19985 (VJ143_19995)	mraY	4281308..4282426 (-)	1119	WP_056517494.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39003.71 Da
• Isoelectric Point: 4.5366

>NTDB_id=926663 VJ143_RS19970 WP_004816660.1 4276608..4277666(-) (comM) [Acinetobacter guillouiae strain 13-3]
MLRLYRKPNKGLIGVDISSTTVKILELSVKNGRYWVESYGLSPLLDGSVVEKNILNPEAVADALERAVNIGNPQSQNVAV
AVPTSMVIHKIIEMDADMSDEEREVQIRMDAEQYIPFPLDEVSLDFEVLKDKLANPNRVNVLLVATRAENIDSRVEVLEI
AGLSPKIADVESYAIERAFDVFSDTLPIGVNLVGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTQDVQNRYGLSYDE
AGRAKKDRTLPDDFETEVLMPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDLKKIENDAPSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=926663 VJ143_RS19970 WP_004816660.1 4276608..4277666(-) (comM) [Acinetobacter guillouiae strain 13-3]
GTGCTTAGACTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCTACTACTGTAAAGATTTTAGAGCT
CTCTGTTAAGAACGGTCGTTACTGGGTTGAAAGTTATGGATTAAGTCCACTGCTCGATGGGAGTGTTGTTGAAAAAAATA
TTCTTAATCCTGAAGCAGTTGCTGATGCGTTGGAAAGGGCAGTCAATATTGGCAATCCTCAATCGCAAAATGTTGCGGTT
GCTGTACCTACATCTATGGTGATTCACAAAATCATTGAAATGGATGCAGATATGTCGGATGAGGAAAGAGAAGTTCAGAT
CCGAATGGATGCTGAACAATATATCCCTTTCCCGCTGGATGAAGTCAGTTTAGATTTTGAAGTGTTAAAAGATAAGCTGG
CAAATCCAAATCGAGTCAATGTGTTACTTGTTGCAACACGTGCAGAGAATATTGATTCTCGTGTTGAAGTTTTAGAAATC
GCAGGCTTATCACCTAAAATTGCAGATGTAGAAAGTTATGCAATTGAGCGTGCTTTTGATGTCTTTTCCGATACCTTGCC
AATCGGTGTAAATCTTGTGGGTATCTTGGATATCGGCCATACCATGACCACCTTGTCTGTGATGCAAAATGGCAAGATCA
TTTATACCCGAGAGCAAGTTTTTGGTGGCAAGCAGCTGACTCAAGATGTACAGAACCGCTATGGCTTGTCTTATGATGAA
GCTGGTCGGGCCAAAAAAGATCGGACTTTACCTGACGATTTTGAAACAGAAGTCTTAATGCCGTTTTTAGAAGCAGTGGT
ACAACAAGCTGCTCGTTCATTACAGTTTTTCTTTTCATCTTCTCAGTTTAACGAGATCGACCATATTTTATTGGCGGGTG
GTAACGCCAATATTCCTGGGTTGGCAAAATTATTACAACAAAAACTCGGTTATCGGGTCACGATTGCAAACCCTTTCTTG
CAGATGGGGTTTTCACCACAAATTGACTTAAAAAAAATAGAAAATGATGCACCTTCTTTAATGGTTGCGTGTGGTTTGGC
TTTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A077L4V4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.375	100	0.844
pilM	Acinetobacter baumannii D1279779	84.091	100	0.841
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.535	100	0.429