Detailed information NTG0925693

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: U5897_RS06285
• Genome accession: NZ_CP142393
• Coordinates: 1295985..1297043 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain 38
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1290985..1302043

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U5897_RS06260 (U5897_06260)	aroK	1291260..1291829 (-)	570	WP_000643712.1	shikimate kinase AroK	-
U5897_RS06265 (U5897_06265)	pilQ	1291841..1294006 (-)	2166	WP_001017029.1	type IV pilus secretin PilQ family protein	Machinery gene
U5897_RS06270 (U5897_06270)	pilP	1294069..1294596 (-)	528	WP_000695061.1	pilus assembly protein PilP	Machinery gene
U5897_RS06275 (U5897_06275)	pilO	1294607..1295347 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
U5897_RS06280 (U5897_06280)	pilN	1295344..1295985 (-)	642	WP_000201221.1	PilN domain-containing protein	Machinery gene
U5897_RS06285 (U5897_06285)	pilM	1295985..1297043 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
U5897_RS06290 (U5897_06290)	ponA	1297205..1299760 (+)	2556	WP_141214586.1	penicillin-binding protein PBP1a	-
U5897_RS06295 (U5897_06295)	-	1299778..1300602 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
U5897_RS06300 (U5897_06300)	-	1300605..1300937 (-)	333	WP_000169599.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=925693 U5897_RS06285 WP_002014066.1 1295985..1297043(-) (pilM) [Acinetobacter baumannii strain 38]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=925693 U5897_RS06285 WP_002014066.1 1295985..1297043(-) (pilM) [Acinetobacter baumannii strain 38]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGACTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTATCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423