Detailed information NTG0925066

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AB5J48_RS02570
• Genome accession: NZ_CP163433
• Coordinates: 688079..688681 (+)
• Length: 200 a.a.
• NCBI ID: WP_189480696.1
• Uniprot ID: -
• Organism: Streptomyces sp. R17
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 683079..693681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5J48_RS02540 (AB5J48_02540)	-	683371..683712 (+)	342	WP_189480701.1	hypothetical protein	-
AB5J48_RS02545 (AB5J48_02545)	-	683777..684760 (-)	984	WP_031016780.1	aldo/keto reductase	-
AB5J48_RS02550 (AB5J48_02550)	-	684840..685547 (-)	708	WP_031016766.1	ribonuclease H	-
AB5J48_RS02555 (AB5J48_02555)	-	685578..686372 (-)	795	WP_242783283.1	VOC family protein	-
AB5J48_RS02560 (AB5J48_02560)	-	686689..687174 (-)	486	WP_189480697.1	VOC family protein	-
AB5J48_RS02565 (AB5J48_02565)	clpP	687426..688079 (+)	654	WP_006133761.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB5J48_RS02570 (AB5J48_02570)	clpP	688079..688681 (+)	603	WP_189480696.1	ClpP family protease	Regulator
AB5J48_RS02575 (AB5J48_02575)	-	688717..689148 (-)	432	WP_189407062.1	RodZ family helix-turn-helix domain-containing protein	-
AB5J48_RS02580 (AB5J48_02580)	-	689425..690312 (+)	888	WP_006133764.1	SigB/SigF/SigG family RNA polymerase sigma factor	-
AB5J48_RS02585 (AB5J48_02585)	-	690397..690852 (-)	456	WP_086682753.1	ATP-binding protein	-
AB5J48_RS02590 (AB5J48_02590)	-	690995..691552 (+)	558	WP_031016756.1	PRC-barrel domain-containing protein	-
AB5J48_RS02595 (AB5J48_02595)	-	691549..691953 (+)	405	WP_006133770.1	PRC-barrel domain-containing protein	-
AB5J48_RS02600 (AB5J48_02600)	-	692058..693317 (+)	1260	WP_369149787.1	streptophobe family protein	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 21586.54 Da
• Isoelectric Point: 5.2906

>NTDB_id=925066 AB5J48_RS02570 WP_189480696.1 688079..688681(+) (clpP) [Streptomyces sp. R17]
MGTYTIPNVVERTARGERSYDVFSRLLAERIVFLGTEIDDGVANVVVAQLLHLESEAPESEIAVYLNSPGGSYTSLMAIY
DTMTFVRAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLGQPAAGGTQGTASDLALRAKEMTRIRAQVEEVLARH
THHDVATLRADMDRDKVFTAQEAVAYGLADEVLTRRPALL

Nucleotide

• Length: 603 bp

>NTDB_id=925066 AB5J48_RS02570 WP_189480696.1 688079..688681(+) (clpP) [Streptomyces sp. R17]
ATGGGGACGTACACGATTCCGAACGTCGTCGAGCGCACCGCGCGCGGCGAGCGGTCCTACGACGTGTTCAGCCGGCTGCT
GGCCGAGCGGATCGTCTTCCTGGGCACGGAGATCGATGACGGCGTCGCCAACGTGGTCGTCGCGCAGCTGCTGCACCTGG
AGTCGGAGGCGCCGGAGAGCGAGATCGCGGTCTACCTCAACTCCCCCGGCGGCTCGTACACCTCGCTCATGGCGATCTAC
GACACGATGACGTTCGTGCGGGCCCCGATCTCCACGTTCTGCGTGGGGCAGGCGGCGTCCACGGCGGCCGTGCTGCTGGC
CGGCGGCGACCCGGGGCGGCGGTTCGTGCTGGAGCACGCGCGCGTGCTGCTCGGCCAGCCGGCCGCCGGGGGGACGCAGG
GCACGGCGTCCGACCTGGCGCTGCGCGCGAAGGAGATGACGCGGATCCGCGCGCAGGTGGAGGAGGTGCTGGCCCGGCAC
ACCCACCACGACGTGGCGACCCTGCGGGCGGACATGGACCGCGACAAGGTCTTCACCGCGCAGGAGGCCGTGGCGTACGG
CCTGGCCGACGAGGTGCTGACCCGGCGTCCCGCCCTGCTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (15-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	49.735	94.5	0.47
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.368	95	0.45
clpP	Streptococcus pneumoniae Rx1	39.062	96	0.375
clpP	Streptococcus pneumoniae D39	39.062	96	0.375
clpP	Streptococcus pneumoniae R6	39.062	96	0.375
clpP	Streptococcus pneumoniae TIGR4	39.062	96	0.375
clpP	Streptococcus pyogenes MGAS315	39.153	94.5	0.37
clpP	Streptococcus pyogenes JRS4	39.153	94.5	0.37
clpP	Streptococcus thermophilus LMG 18311	38.021	96	0.365
clpP	Streptococcus thermophilus LMD-9	38.021	96	0.365
clpP	Lactococcus lactis subsp. cremoris KW2	38.22	95.5	0.365