Detailed information NTG0919879

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: VO179_RS05675
• Genome accession: NZ_CP141827
• Coordinates: 1273849..1274463 (-)
• Length: 204 a.a.
• NCBI ID: WP_053573180.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain XHA14
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1268849..1279463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VO179_RS05645 (VO179_05645)	rpsT	1269152..1269418 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
VO179_RS05650 (VO179_05650)	holA	1269435..1270476 (-)	1042	Protein_1125	DNA polymerase III subunit delta	-
VO179_RS05655 (VO179_05655)	-	1270516..1270667 (-)	152	Protein_1126	hypothetical protein	-
VO179_RS05660 (VO179_05660)	-	1270708..1270842 (+)	135	WP_003152870.1	YqzM family protein	-
VO179_RS05665 (VO179_05665)	comEC	1270861..1273212 (-)	2352	WP_324636680.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
VO179_RS05670 (VO179_05670)	-	1273213..1273782 (-)	570	WP_003152868.1	ComE operon protein 2	-
VO179_RS05675 (VO179_05675)	comEA	1273849..1274463 (-)	615	WP_053573180.1	helix-hairpin-helix domain-containing protein	Machinery gene
VO179_RS05680 (VO179_05680)	comER	1274522..1275343 (+)	822	WP_015417855.1	late competence protein ComER	-
VO179_RS05685 (VO179_05685)	-	1275412..1276149 (-)	738	WP_015417856.1	class I SAM-dependent DNA methyltransferase	-
VO179_RS05690 (VO179_05690)	rsfS	1276146..1276502 (-)	357	WP_007408260.1	ribosome silencing factor	-
VO179_RS05695 (VO179_05695)	yqeK	1276520..1277080 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
VO179_RS05700 (VO179_05700)	-	1277070..1277639 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
VO179_RS05705 (VO179_05705)	yhbY	1277650..1277940 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
VO179_RS05710 (VO179_05710)	aroE	1277934..1278776 (-)	843	WP_324636675.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22183.34 Da
• Isoelectric Point: 6.4888

>NTDB_id=919879 VO179_RS05675 WP_053573180.1 1273849..1274463(-) (comEA) [Bacillus velezensis strain XHA14]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTAADKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTMVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=919879 VO179_RS05675 WP_053573180.1 1273849..1274463(-) (comEA) [Bacillus velezensis strain XHA14]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGCATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTCGGCCAAACAGCCTCAGCAT
CCGTTGCGGACAAAAAAGACACCGCAGCCGATAAGATTATGATTGATGTGAAAGGTGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATGGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CGGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (68-122)

• Helix-hairpin-helix motif (HHH_3) (141-202)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA	Latilactobacillus sakei subsp. sakei 23K	32.328	100	0.368
comEA/celA/cilE	Streptococcus mitis NCTC 12261	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae D39	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae R6	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363