Detailed information NTG0918558

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VNN52_RS08920
• Genome accession: NZ_CP141701
• Coordinates: 1723860..1724729 (+)
• Length: 289 a.a.
• NCBI ID: WP_019291673.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain M18012501 FF2g6
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1718860..1729729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN52_RS08900 (VNN52_08880)	-	1719184..1719804 (+)	621	WP_019291676.1	GntR family transcriptional regulator	-
VNN52_RS08905 (VNN52_08885)	-	1720010..1721212 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
VNN52_RS08910 (VNN52_08890)	-	1721205..1722929 (+)	1725	WP_153924855.1	ABC transporter permease/substrate binding protein	-
VNN52_RS08915 (VNN52_08895)	budA	1723075..1723773 (+)	699	WP_019291674.1	acetolactate decarboxylase	-
VNN52_RS08920 (VNN52_08900)	dprA	1723860..1724729 (+)	870	WP_019291673.1	DNA-processing protein DprA	Machinery gene
VNN52_RS08925 (VNN52_08905)	topA	1724918..1727068 (+)	2151	WP_153925516.1	type I DNA topoisomerase	-
VNN52_RS08930 (VNN52_08910)	trmFO	1727117..1728460 (+)	1344	WP_153924852.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
VNN52_RS08935 (VNN52_08915)	-	1728534..1728755 (-)	222	WP_019292266.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32915.11 Da
• Isoelectric Point: 9.9099

>NTDB_id=918558 VNN52_RS08920 WP_019291673.1 1723860..1724729(+) (dprA) [Lactococcus petauri strain M18012501 FF2g6]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEARLTLRQLSRIAEVKTVPNFIESYKSQDVKRLREQYKIFPSFSILDDIY
PEWLRETYNPPALLFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLAAHELVLSEYLVGEQPLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=918558 VNN52_RS08920 WP_019291673.1 1723860..1724729(+) (dprA) [Lactococcus petauri strain M18012501 FF2g6]
ATGATTAAAAACTTTGAAATATTACGTTTGAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAGACTCACTCTACGCCAGTTATCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAATTTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCACCTGCCCTCCTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGCAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCACAAGCTTATTGAGGAATTAAAGCAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATTGCTGTCATTGGTAATGGGTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAACCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TTTCCCGTGGAGTTGTCGTTGTGGAAGCAAAACAACGTAGTGGTAGCCTTATCACAAGTCGTTATGCTTTAGAGGGTAAT
AGAGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCTTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	55.197	96.54	0.533
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus mitis SK321	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	52.688	96.54	0.509
dprA	Latilactobacillus sakei subsp. sakei 23K	38.909	95.156	0.37