Detailed information NTG0918512

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VNN27_RS08365
• Genome accession: NZ_CP141700
• Coordinates: 1714341..1715210 (+)
• Length: 289 a.a.
• NCBI ID: WP_346349869.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain R22-25 IC35
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1709341..1720210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN27_RS08345 (VNN27_08345)	-	1709666..1710286 (+)	621	WP_019291676.1	GntR family transcriptional regulator	-
VNN27_RS08350 (VNN27_08350)	-	1710491..1711693 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
VNN27_RS08355 (VNN27_08355)	-	1711686..1713410 (+)	1725	WP_086582599.1	ABC transporter permease/substrate binding protein	-
VNN27_RS08360 (VNN27_08360)	budA	1713556..1714254 (+)	699	WP_285119647.1	acetolactate decarboxylase	-
VNN27_RS08365 (VNN27_08365)	dprA	1714341..1715210 (+)	870	WP_346349869.1	DNA-processing protein DprA	Machinery gene
VNN27_RS08370 (VNN27_08370)	topA	1715399..1717549 (+)	2151	WP_061413090.1	type I DNA topoisomerase	-
VNN27_RS08375 (VNN27_08375)	trmFO	1717595..1718938 (+)	1344	WP_019293951.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
VNN27_RS08380 (VNN27_08380)	-	1719012..1719233 (-)	222	WP_019292266.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32919.09 Da
• Isoelectric Point: 9.8096

>NTDB_id=918512 VNN27_RS08365 WP_346349869.1 1714341..1715210(+) (dprA) [Lactococcus petauri strain R22-25 IC35]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEAKLTLRQLARIAEVKTVPNFIESYKSQDVKRLREQYKVFPSFSILDDIY
PEWLRETYNPPALLFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLAAHELVLSEYLVGEQSLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEEN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=918512 VNN27_RS08365 WP_346349869.1 1714341..1715210(+) (dprA) [Lactococcus petauri strain R22-25 IC35]
ATGATTAAAAACTTTGAAATATTACGTTTAAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAAACTCACTCTACGCCAGTTAGCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAGTCTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCGCCTGCCCTCCTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGCAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCACAAGCTTATTGAGGAATTAAAGCAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATCGCTGTCATTGGTAATGGGTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAATCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TGTCCCGTGGTGTTGTCGTTGTTGAAGCAAAACAACGTAGCGGTAGCCTTATTACAAGTCGTTATGCTTTAGAGGAAAAT
AGGGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCTTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.958	97.924	0.626
dprA	Streptococcus mutans UA159	55.556	96.54	0.536
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis SK321	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.047	96.54	0.512
dprA	Latilactobacillus sakei subsp. sakei 23K	39.636	95.156	0.377