Detailed information NTG0918467

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VNN49_RS08425
• Genome accession: NZ_CP141699
• Coordinates: 1730235..1731104 (+)
• Length: 289 a.a.
• NCBI ID: WP_019293953.1
• Uniprot ID: A0AAJ2IZH0
• Organism: Lactococcus petauri strain M17100408 FF4i7
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1725235..1736104

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN49_RS08405 (VNN49_08405)	-	1725563..1726183 (+)	621	WP_019291676.1	GntR family transcriptional regulator	-
VNN49_RS08410 (VNN49_08410)	-	1726388..1727590 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
VNN49_RS08415 (VNN49_08415)	-	1727583..1729307 (+)	1725	WP_019293955.1	ABC transporter permease/substrate binding protein	-
VNN49_RS08420 (VNN49_08420)	budA	1729450..1730148 (+)	699	WP_019293954.1	acetolactate decarboxylase	-
VNN49_RS08425 (VNN49_08425)	dprA	1730235..1731104 (+)	870	WP_019293953.1	DNA-processing protein DprA	Machinery gene
VNN49_RS08430 (VNN49_08430)	topA	1731293..1733443 (+)	2151	WP_029345828.1	type I DNA topoisomerase	-
VNN49_RS08435 (VNN49_08435)	trmFO	1733492..1734835 (+)	1344	WP_019293951.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
VNN49_RS08440 (VNN49_08440)	-	1734909..1735130 (-)	222	WP_019292266.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32871.09 Da
• Isoelectric Point: 9.9003

>NTDB_id=918467 VNN49_RS08425 WP_019293953.1 1730235..1731104(+) (dprA) [Lactococcus petauri strain M17100408 FF4i7]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEAKLTLRQLARIAEVKTVPNFIESYKSQDVKRLREQYKIFPSFSILDDIY
PEWLRETYNPPALLFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLAAHELVLSEYLVGEQPLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=918467 VNN49_RS08425 WP_019293953.1 1730235..1731104(+) (dprA) [Lactococcus petauri strain M17100408 FF4i7]
ATGATTAAAAACTTTGAAATATTACGTTTAAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAAACTCACTCTACGCCAGTTAGCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAATTTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCGCCTGCCCTCCTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGTAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCACAAGCTTATTGAGGAATTAAAGCAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATTGCTGTCATTGGTAATGGGTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAACCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TTTCCCGTGGTGTTGTTGTTGTGGAAGCAAAACAACGTAGTGGTAGCCTTATCACAAGTCGTTATGCTTTAGAGGGTAAT
AGAGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCTTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.958	97.924	0.626
dprA	Streptococcus mutans UA159	55.556	96.54	0.536
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis SK321	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.047	96.54	0.512
dprA	Latilactobacillus sakei subsp. sakei 23K	39.273	95.156	0.374