Detailed information NTG0918332

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VNN34_RS09170
• Genome accession: NZ_CP141696
• Coordinates: 1830560..1831429 (+)
• Length: 289 a.a.
• NCBI ID: WP_019293953.1
• Uniprot ID: A0AAJ2IZH0
• Organism: Lactococcus petauri strain S69-A
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1825560..1836429

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN34_RS09150 (VNN34_09150)	-	1825886..1826506 (+)	621	WP_019291676.1	GntR family transcriptional regulator	-
VNN34_RS09155 (VNN34_09155)	-	1826711..1827913 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
VNN34_RS09160 (VNN34_09160)	-	1827906..1829630 (+)	1725	WP_206887366.1	ABC transporter permease/substrate binding protein	-
VNN34_RS09165 (VNN34_09165)	budA	1829775..1830473 (+)	699	WP_046401190.1	acetolactate decarboxylase	-
VNN34_RS09170 (VNN34_09170)	dprA	1830560..1831429 (+)	870	WP_019293953.1	DNA-processing protein DprA	Machinery gene
VNN34_RS09175 (VNN34_09175)	topA	1831618..1833768 (+)	2151	WP_206887365.1	type I DNA topoisomerase	-
VNN34_RS09180 (VNN34_09180)	trmFO	1833817..1835160 (+)	1344	WP_206887364.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
VNN34_RS09185 (VNN34_09185)	-	1835234..1835455 (-)	222	WP_019292266.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32871.09 Da
• Isoelectric Point: 9.9003

>NTDB_id=918332 VNN34_RS09170 WP_019293953.1 1830560..1831429(+) (dprA) [Lactococcus petauri strain S69-A]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEAKLTLRQLARIAEVKTVPNFIESYKSQDVKRLREQYKIFPSFSILDDIY
PEWLRETYNPPALLFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLAAHELVLSEYLVGEQPLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=918332 VNN34_RS09170 WP_019293953.1 1830560..1831429(+) (dprA) [Lactococcus petauri strain S69-A]
ATGATTAAAAACTTTGAAATATTACGTTTAAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAAACTCACTCTACGCCAGTTAGCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAATTTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCGCCTGCCCTCCTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGTAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCATAAGCTTATTGAGGAATTAAAGCAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATTGCTGTCATTGGTAATGGGTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAACCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TTTCCCGTGGTGTTGTTGTTGTGGAAGCAAAACAACGTAGTGGTAGCCTTATCACAAGTCGTTATGCTTTAGAGGGTAAT
AGAGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCTTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.958	97.924	0.626
dprA	Streptococcus mutans UA159	55.556	96.54	0.536
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis SK321	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.047	96.54	0.512
dprA	Latilactobacillus sakei subsp. sakei 23K	39.273	95.156	0.374