Detailed information NTG0918021

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VNN29_RS01765
• Genome accession: NZ_CP141686
• Coordinates: 357021..357890 (-)
• Length: 289 a.a.
• NCBI ID: WP_019293953.1
• Uniprot ID: A0AAJ2IZH0
• Organism: Lactococcus petauri strain UCD-FS1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 352021..362890

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN29_RS01750 (VNN29_01750)	-	352994..353215 (+)	222	WP_019292266.1	hypothetical protein	-
VNN29_RS01755 (VNN29_01755)	trmFO	353289..354632 (-)	1344	WP_046401193.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
VNN29_RS01760 (VNN29_01760)	topA	354681..356831 (-)	2151	WP_046401192.1	type I DNA topoisomerase	-
VNN29_RS01765 (VNN29_01765)	dprA	357021..357890 (-)	870	WP_019293953.1	DNA-processing protein DprA	Machinery gene
VNN29_RS01770 (VNN29_01770)	budA	357977..358675 (-)	699	WP_046401190.1	acetolactate decarboxylase	-
VNN29_RS01775 (VNN29_01775)	-	358820..360544 (-)	1725	WP_206887366.1	ABC transporter permease/substrate binding protein	-
VNN29_RS01780 (VNN29_01780)	-	360537..361739 (-)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
VNN29_RS01785 (VNN29_01785)	-	361944..362564 (-)	621	WP_019291676.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32871.09 Da
• Isoelectric Point: 9.9003

>NTDB_id=918021 VNN29_RS01765 WP_019293953.1 357021..357890(-) (dprA) [Lactococcus petauri strain UCD-FS1]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEAKLTLRQLARIAEVKTVPNFIESYKSQDVKRLREQYKIFPSFSILDDIY
PEWLRETYNPPALLFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLAAHELVLSEYLVGEQPLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=918021 VNN29_RS01765 WP_019293953.1 357021..357890(-) (dprA) [Lactococcus petauri strain UCD-FS1]
ATGATTAAAAACTTTGAAATATTACGTTTAAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAAACTCACTCTACGCCAGTTAGCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAATTTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCGCCTGCCCTCCTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGTAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCATAAGCTTATTGAGGAATTAAAGCAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATTGCTGTCATTGGTAATGGGTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAACCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TTTCCCGTGGTGTTGTTGTTGTGGAAGCAAAACAACGTAGTGGTAGCCTTATCACAAGTCGTTATGCTTTAGAGGGTAAT
AGAGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCTTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.958	97.924	0.626
dprA	Streptococcus mutans UA159	55.556	96.54	0.536
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis SK321	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.047	96.54	0.512
dprA	Latilactobacillus sakei subsp. sakei 23K	39.273	95.156	0.374