Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | OCV19_RS01265 | Genome accession | NZ_AP025463 |
| Coordinates | 281419..282048 (+) | Length | 209 a.a. |
| NCBI ID | WP_065676548.1 | Uniprot ID | A0A1C3JEJ9 |
| Organism | Vibrio celticus strain CECT 7224 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 276419..287048
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCV19_RS01250 | - | 277105..279666 (-) | 2562 | WP_065676551.1 | penicillin-binding protein 1A | - |
| OCV19_RS01255 | pilM | 279818..280843 (+) | 1026 | WP_065676550.1 | type IV pilus assembly protein PilM | Machinery gene |
| OCV19_RS01260 | pilN | 280827..281426 (+) | 600 | WP_065676549.1 | PilN domain-containing protein | Machinery gene |
| OCV19_RS01265 | pilO | 281419..282048 (+) | 630 | WP_065676548.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OCV19_RS01270 | pilP | 282035..282553 (+) | 519 | WP_065676547.1 | pilus assembly protein PilP | Machinery gene |
| OCV19_RS01275 | pilQ | 282589..284307 (+) | 1719 | WP_065676546.1 | type IV pilus secretin PilQ | Machinery gene |
| OCV19_RS01280 | aroK | 284484..285002 (+) | 519 | WP_017061125.1 | shikimate kinase AroK | - |
| OCV19_RS01285 | aroB | 285028..286116 (+) | 1089 | WP_017061124.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24306.85 Da Isoelectric Point: 4.7934
>NTDB_id=91682 OCV19_RS01265 WP_065676548.1 281419..282048(+) (pilO) [Vibrio celticus strain CECT 7224]
MANLQNRIGRQNRMSLQDLDVDEITEWPLLPQLLVILVLMVLIQGVGTWLYLLPLDEELQQMKHQEQTLKTTLRIKANKV
AALPKLQSQLDELTSRYDYLLEQLPVQKELASMLASVNELGLDNSLTFTRIDWGQKQNKEFLYRLPLNIELTGDYHEIGD
FSAAIAKLPRIISFDDVNWQRVSQESSTLHFRVRAYTYQFKSEVNDETQ
MANLQNRIGRQNRMSLQDLDVDEITEWPLLPQLLVILVLMVLIQGVGTWLYLLPLDEELQQMKHQEQTLKTTLRIKANKV
AALPKLQSQLDELTSRYDYLLEQLPVQKELASMLASVNELGLDNSLTFTRIDWGQKQNKEFLYRLPLNIELTGDYHEIGD
FSAAIAKLPRIISFDDVNWQRVSQESSTLHFRVRAYTYQFKSEVNDETQ
Nucleotide
Download Length: 630 bp
>NTDB_id=91682 OCV19_RS01265 WP_065676548.1 281419..282048(+) (pilO) [Vibrio celticus strain CECT 7224]
ATGGCTAACCTTCAAAATAGGATTGGTAGGCAAAACAGGATGAGCTTGCAAGATCTCGATGTTGATGAGATCACCGAATG
GCCATTGTTGCCTCAGCTTCTCGTGATTCTGGTGTTGATGGTGTTAATCCAAGGTGTTGGTACTTGGCTGTATCTGCTGC
CGCTCGACGAGGAACTGCAACAAATGAAGCATCAGGAGCAGACCTTAAAAACGACCTTGAGGATAAAGGCGAATAAGGTT
GCAGCCTTGCCTAAGTTGCAGAGCCAGTTGGATGAGCTAACTAGTCGTTACGATTATCTATTAGAGCAGCTGCCCGTTCA
AAAGGAGTTAGCGAGCATGCTGGCCTCCGTGAATGAGCTCGGCTTGGATAACTCACTGACCTTCACACGAATCGATTGGG
GGCAAAAGCAGAATAAGGAGTTTCTCTATCGATTGCCTCTCAATATAGAGCTGACAGGTGACTATCACGAGATTGGGGAC
TTCTCTGCTGCTATCGCCAAGCTGCCGCGCATCATCAGCTTTGATGATGTGAATTGGCAGCGAGTCAGCCAAGAAAGTAG
CACGCTGCATTTTAGGGTTCGAGCTTATACCTACCAGTTTAAATCGGAGGTCAATGATGAAACCCAATAG
ATGGCTAACCTTCAAAATAGGATTGGTAGGCAAAACAGGATGAGCTTGCAAGATCTCGATGTTGATGAGATCACCGAATG
GCCATTGTTGCCTCAGCTTCTCGTGATTCTGGTGTTGATGGTGTTAATCCAAGGTGTTGGTACTTGGCTGTATCTGCTGC
CGCTCGACGAGGAACTGCAACAAATGAAGCATCAGGAGCAGACCTTAAAAACGACCTTGAGGATAAAGGCGAATAAGGTT
GCAGCCTTGCCTAAGTTGCAGAGCCAGTTGGATGAGCTAACTAGTCGTTACGATTATCTATTAGAGCAGCTGCCCGTTCA
AAAGGAGTTAGCGAGCATGCTGGCCTCCGTGAATGAGCTCGGCTTGGATAACTCACTGACCTTCACACGAATCGATTGGG
GGCAAAAGCAGAATAAGGAGTTTCTCTATCGATTGCCTCTCAATATAGAGCTGACAGGTGACTATCACGAGATTGGGGAC
TTCTCTGCTGCTATCGCCAAGCTGCCGCGCATCATCAGCTTTGATGATGTGAATTGGCAGCGAGTCAGCCAAGAAAGTAG
CACGCTGCATTTTAGGGTTCGAGCTTATACCTACCAGTTTAAATCGGAGGTCAATGATGAAACCCAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
76.166 |
92.344 |
0.703 |
| pilO | Vibrio campbellii strain DS40M4 |
74.054 |
88.517 |
0.656 |