Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | OCV19_RS01270 | Genome accession | NZ_AP025463 |
| Coordinates | 282035..282553 (+) | Length | 172 a.a. |
| NCBI ID | WP_065676547.1 | Uniprot ID | A0A1C3JEN9 |
| Organism | Vibrio celticus strain CECT 7224 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 277035..287553
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCV19_RS01250 | - | 277105..279666 (-) | 2562 | WP_065676551.1 | penicillin-binding protein 1A | - |
| OCV19_RS01255 | pilM | 279818..280843 (+) | 1026 | WP_065676550.1 | type IV pilus assembly protein PilM | Machinery gene |
| OCV19_RS01260 | pilN | 280827..281426 (+) | 600 | WP_065676549.1 | PilN domain-containing protein | Machinery gene |
| OCV19_RS01265 | pilO | 281419..282048 (+) | 630 | WP_065676548.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OCV19_RS01270 | pilP | 282035..282553 (+) | 519 | WP_065676547.1 | pilus assembly protein PilP | Machinery gene |
| OCV19_RS01275 | pilQ | 282589..284307 (+) | 1719 | WP_065676546.1 | type IV pilus secretin PilQ | Machinery gene |
| OCV19_RS01280 | aroK | 284484..285002 (+) | 519 | WP_017061125.1 | shikimate kinase AroK | - |
| OCV19_RS01285 | aroB | 285028..286116 (+) | 1089 | WP_017061124.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19125.27 Da Isoelectric Point: 10.8280
>NTDB_id=91683 OCV19_RS01270 WP_065676547.1 282035..282553(+) (pilP) [Vibrio celticus strain CECT 7224]
MKPNSAFFSIVLMLALSGCKANQDSLQDFVAQVEAKARKDVEQLVPATEFTAAIYQRRSLRPPFELPKEAIVQNQPLVKK
DCWQPSARSRNGKLEKYPLSKLRLRGVMGSGSSVFGLVQTPKGNVVNVKKGQFIGLNNGRVTKVTSQYVQINETLPDGLG
CWHKRNVRLALK
MKPNSAFFSIVLMLALSGCKANQDSLQDFVAQVEAKARKDVEQLVPATEFTAAIYQRRSLRPPFELPKEAIVQNQPLVKK
DCWQPSARSRNGKLEKYPLSKLRLRGVMGSGSSVFGLVQTPKGNVVNVKKGQFIGLNNGRVTKVTSQYVQINETLPDGLG
CWHKRNVRLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=91683 OCV19_RS01270 WP_065676547.1 282035..282553(+) (pilP) [Vibrio celticus strain CECT 7224]
ATGAAACCCAATAGCGCGTTTTTCTCAATCGTATTGATGCTTGCGTTGTCAGGCTGCAAAGCTAATCAAGACTCACTGCA
AGACTTTGTCGCACAGGTTGAAGCCAAGGCGAGAAAAGACGTCGAGCAACTTGTCCCAGCAACTGAATTCACGGCGGCGA
TTTATCAGCGCCGATCTTTGCGTCCTCCCTTTGAACTGCCTAAAGAAGCCATTGTGCAAAACCAACCCTTGGTCAAGAAA
GACTGTTGGCAACCCAGCGCCCGTTCTCGTAATGGCAAGTTAGAGAAGTATCCGCTGAGTAAGCTTCGTTTAAGAGGCGT
GATGGGCAGTGGCTCAAGCGTGTTTGGCTTAGTGCAAACACCCAAAGGCAACGTGGTAAACGTCAAGAAAGGCCAGTTTA
TCGGCTTAAACAATGGCCGAGTTACTAAGGTGACGAGCCAATACGTTCAGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCATAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
ATGAAACCCAATAGCGCGTTTTTCTCAATCGTATTGATGCTTGCGTTGTCAGGCTGCAAAGCTAATCAAGACTCACTGCA
AGACTTTGTCGCACAGGTTGAAGCCAAGGCGAGAAAAGACGTCGAGCAACTTGTCCCAGCAACTGAATTCACGGCGGCGA
TTTATCAGCGCCGATCTTTGCGTCCTCCCTTTGAACTGCCTAAAGAAGCCATTGTGCAAAACCAACCCTTGGTCAAGAAA
GACTGTTGGCAACCCAGCGCCCGTTCTCGTAATGGCAAGTTAGAGAAGTATCCGCTGAGTAAGCTTCGTTTAAGAGGCGT
GATGGGCAGTGGCTCAAGCGTGTTTGGCTTAGTGCAAACACCCAAAGGCAACGTGGTAAACGTCAAGAAAGGCCAGTTTA
TCGGCTTAAACAATGGCCGAGTTACTAAGGTGACGAGCCAATACGTTCAGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCATAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
60.465 |
100 |
0.605 |
| pilP | Vibrio campbellii strain DS40M4 |
55.03 |
98.256 |
0.541 |