Detailed information NTG0908823

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: SOI74_RS11695
• Genome accession: NZ_CP139287
• Coordinates: 2476880..2477998 (-)
• Length: 372 a.a.
• NCBI ID: WP_032057670.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain 564U
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2471880..2482998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI74_RS11665 (SOI74_11665)	-	2472707..2473555 (+)	849	WP_069035913.1	class II glutamine amidotransferase	-
SOI74_RS11670 (SOI74_11670)	-	2473808..2474263 (+)	456	WP_000782976.1	bacteriohemerythrin	-
SOI74_RS11675 (SOI74_11675)	-	2474417..2475484 (+)	1068	WP_141690931.1	hypothetical protein	-
SOI74_RS11680 (SOI74_11680)	-	2475484..2475798 (+)	315	WP_068551233.1	RnfH family protein	-
SOI74_RS11685 (SOI74_11685)	omlA	2475863..2476261 (-)	399	WP_002121740.1	outer membrane protein assembly factor BamE	-
SOI74_RS11690 (SOI74_11690)	fur	2476373..2476810 (+)	438	WP_002121758.1	ferric iron uptake transcriptional regulator	-
SOI74_RS11695 (SOI74_11695)	pilU	2476880..2477998 (-)	1119	WP_032057670.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
SOI74_RS11700 (SOI74_11700)	pilT	2478018..2479055 (-)	1038	WP_002121749.1	type IV pilus twitching motility protein PilT	Machinery gene
SOI74_RS11705 (SOI74_11705)	yggS	2479182..2479874 (+)	693	WP_182917524.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41975.16 Da
• Isoelectric Point: 6.5062

>NTDB_id=908823 SOI74_RS11695 WP_032057670.1 2476880..2477998(-) (pilU) [Acinetobacter pittii strain 564U]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEIIGQLLHSIMSEKQRKEFAETRECNFAIMNRDKSA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISYRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKSGQITYKDALKHADSPNDLRLTIKLAEEDPEQIAGTNQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=908823 SOI74_RS11695 WP_032057670.1 2476880..2477998(-) (pilU) [Acinetobacter pittii strain 564U]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAAAAATCATCCGACCTCTTTATTACAGATGGCGTTGCACCATC
GATGAAGATTAACGGGCAAATTGTTCCCATTTCAAAAAATAGTCTTTCAGGCGAAATTATTGGTCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCTGAGACTCGTGAATGTAATTTTGCGATTATGAACCGCGATAAAAGTGCG
CGCTTTCGTGTCAGTGCTTTTCAGCAACGCGACATGCCAGGCATGGTATTACGTCGAATTGAAACTAAAATTCCTTCAAT
TGATGACTTGCAATTACCACCTGTGCTTAAAGATTTATCGATGACCAAACGTGGCATCATTATTTTTGTAGGGGCAACAG
GTACAGGTAAATCGACATCTTTGGCTTCAATGATTAGCTATCGGAACCATAACTCTAAAGGTCATATCATTACCATTGAA
GACCCTATCGAGTTTATTCATGAACATGCTGGTTGCATCATTACCCAACGTGAAGTCGGGATTGATACAGACTCATTCGA
AATTGCCTTAAAGAATACTTTGCGACAAGCACCCGATGTAATCTTGATTGGTGAGATTCGCTCTCGTGAAGTCATGGACT
ATGCGATTGGTTTTGCCGAAACAGGTCACCTTGTATTAGCCACAATGCATGCGAACAACGCCAACCAAGCACTTGACCGT
ATTATTCACTTCTTTGAAAGTGACCGTCATAGCCAGCTCTACATGGATTTATCGCTTAATTTAAAGGCCATGATTGCACA
GCAACTTATTCCGACTCCAGATGGTAATTCTCGCCGTGCAGCGATTGAGATTCTCATTAACTCCCCATTAATTTCAGACT
ATATTCGTAAAGGTGAAATTCATGAAATTAAAGATTTAATGAAACGCTCACGTGAACTCGGTATGCAAACTTTCGACCAA
GCACTGTTTGATCTTTATAAGTCAGGCCAAATTACCTACAAAGATGCATTAAAACATGCCGACTCACCAAACGATTTACG
TTTAACAATTAAGCTTGCCGAAGAAGATCCTGAGCAAATTGCAGGCACAAATCAGCATTTAACCTTCGACAGACAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (32-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.003	99.731	0.688
pilU	Vibrio cholerae strain A1552	54.054	99.462	0.538
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392
pilT	Legionella pneumophila strain Lp02	39.941	90.86	0.363
pilT	Legionella pneumophila strain ERS1305867	39.941	90.86	0.363