Detailed information NTG0908505

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: SOI79_RS02920
• Genome accession: NZ_CP139266
• Coordinates: 610516..611634 (+)
• Length: 372 a.a.
• NCBI ID: WP_032055148.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HUM14
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 605516..616634

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI79_RS02910 (SOI79_02910)	yggS	608640..609332 (-)	693	WP_057062208.1	YggS family pyridoxal phosphate-dependent enzyme	-
SOI79_RS02915 (SOI79_02915)	pilT	609459..610496 (+)	1038	WP_002121749.1	type IV pilus twitching motility protein PilT	Machinery gene
SOI79_RS02920 (SOI79_02920)	pilU	610516..611634 (+)	1119	WP_032055148.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
SOI79_RS02925 (SOI79_02925)	fur	611704..612141 (-)	438	WP_002121758.1	ferric iron uptake transcriptional regulator	-
SOI79_RS02930 (SOI79_02930)	omlA	612253..612651 (+)	399	WP_002121740.1	outer membrane protein assembly factor BamE	-
SOI79_RS02935 (SOI79_02935)	-	612716..613030 (-)	315	WP_014205982.1	RnfH family protein	-
SOI79_RS02940 (SOI79_02940)	-	613030..614097 (-)	1068	WP_057062218.1	hypothetical protein	-
SOI79_RS02945 (SOI79_02945)	-	614251..614706 (-)	456	WP_002121698.1	bacteriohemerythrin	-
SOI79_RS02950 (SOI79_02950)	-	614958..615806 (-)	849	WP_057062207.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41917.12 Da
• Isoelectric Point: 6.6403

>NTDB_id=908505 SOI79_RS02920 WP_032055148.1 610516..611634(+) (pilU) [Acinetobacter pittii strain HUM14]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEIIGQLLHSIMSEKQRKEFAETRECNFAIMNRDKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISYRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEVALKNTLRQAPDVILIGEIRTREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKSGQITYKDALKHADSPNDLRLTIKLAEEGPDQIAGTNQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=908505 SOI79_RS02920 WP_032055148.1 610516..611634(+) (pilU) [Acinetobacter pittii strain HUM14]
ATGGATTTTAATGACCTGCTCAACCTCATGGTTGAAAAAAAATCATCCGACCTCTTTATTACAGATGGCGTTGCACCATC
GATGAAGATTAACGGGCAAATTGTTCCCATTTCAAAAAATAGTCTTTCAGGCGAAATTATCGGGCAACTATTACACTCCA
TCATGAGTGAAAAACAGCGCAAAGAATTTGCTGAGACTCGTGAATGTAACTTTGCCATTATGAACCGTGATAAAACTGCC
CGCTTTCGTGTGAGTGCTTTTCAACAGCGTGACATGCCCGGCATGGTACTACGTCGAATTGAAACTAAAATTCCTTCAAT
TGATGACTTGCAGTTACCACCTGTGCTTAAAGATTTATCGATGACCAAACGCGGCATCATTATTTTTGTAGGTGCAACAG
GTACAGGTAAATCGACATCATTGGCTTCAATGATTAGCTATCGTAACCATAACTCTAAAGGTCATATCATTACCATTGAA
GACCCTATCGAGTTTATTCATGAACATGCTGGCTGCATCATTACCCAACGTGAAGTCGGGATCGATACTGATTCATTTGA
AGTAGCTTTAAAGAATACTTTGCGACAAGCACCCGATGTAATCTTGATTGGTGAGATCCGTACGCGTGAAGTCATGGACT
ATGCGATTGGTTTTGCCGAAACGGGTCACTTGGTCTTAGCCACGATGCATGCGAACAACGCCAACCAAGCACTTGATCGT
ATTATTCACTTCTTTGAAAGTGATCGCCACAGCCAGCTCTACATGGACTTATCTCTTAACTTAAAGGCCATGATTGCACA
ACAACTTATTCCGACTCCAGATGGTAATTCGCGCCGTGCAGCGATTGAGATTCTCATTAACTCACCACTAATTTCAGACT
ATATTCGTAAAGGCGAAATTCATGAAATTAAAGATTTAATGAAACGCTCACGTGAACTCGGTATGCAAACTTTTGACCAA
GCACTGTTTGATCTTTATAAGTCAGGCCAAATTACCTACAAAGATGCATTAAAACATGCCGACTCACCAAACGATTTACG
TTTAACAATTAAGCTTGCCGAAGAAGGTCCTGATCAAATTGCAGGCACAAATCAGCATTTAACCTTCGACAGACAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (33-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	74.868	100	0.761
pilU	Pseudomonas stutzeri DSM 10701	69.003	99.731	0.688
pilU	Vibrio cholerae strain A1552	54.054	99.462	0.538
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	40.934	97.849	0.401
pilT	Legionella pneumophila strain Lp02	39.941	90.86	0.363
pilT	Legionella pneumophila strain ERS1305867	39.941	90.86	0.363