Detailed information NTG0906935

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: SDC64_RS01515
• Genome accession: NZ_CP139048
• Coordinates: 304059..305117 (+)
• Length: 352 a.a.
• NCBI ID: WP_004641327.1
• Uniprot ID: N9GSK6
• Organism: Acinetobacter haemolyticus strain JS-1us
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 299059..310117

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDC64_RS01500 (SDC64_01500)	mraY	299276..300394 (+)	1119	WP_005087040.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
SDC64_RS01505 (SDC64_01505)	-	300457..301275 (+)	819	WP_320532891.1	putative RNA methyltransferase	-
SDC64_RS01510 (SDC64_01510)	ponA	301304..303895 (-)	2592	WP_320532892.1	penicillin-binding protein PBP1a	-
SDC64_RS01515 (SDC64_01515)	comM	304059..305117 (+)	1059	WP_004641327.1	pilus assembly protein PilM	Machinery gene
SDC64_RS01520 (SDC64_01520)	pilN	305117..305761 (+)	645	WP_004641325.1	PilN domain-containing protein	Machinery gene
SDC64_RS01525 (SDC64_01525)	pilO	305758..306468 (+)	711	WP_320532893.1	type 4a pilus biogenesis protein PilO	Machinery gene
SDC64_RS01530 (SDC64_01530)	pilP	306468..306995 (+)	528	WP_320532894.1	pilus assembly protein PilP	Machinery gene
SDC64_RS01535 (SDC64_01535)	pilQ	307057..309189 (+)	2133	WP_171055820.1	type IV pilus secretin PilQ family protein	Machinery gene
SDC64_RS01540 (SDC64_01540)	aroK	309228..309770 (+)	543	WP_005087029.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39194.96 Da
• Isoelectric Point: 4.5976

>NTDB_id=906935 SDC64_RS01515 WP_004641327.1 304059..305117(+) (comM) [Acinetobacter haemolyticus strain JS-1us]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYAVMPLPENSVVEKSILNPEAVGDALERVVNLANPHTSNVAM
AIPTSMVINKIIEMDADMTDEEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLNNPNRVNVLLVATRTENVDTRVEVLEL
AGLTAKKADVESYAMERAFCVFSDTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDIQSRYGLSFEE
AGRAKKERTLPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=906935 SDC64_RS01515 WP_004641327.1 304059..305117(+) (comM) [Acinetobacter haemolyticus strain JS-1us]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGGGTCGATATTAGTTCGACAACTGTTAAATTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGTTATGCTGTGATGCCGCTGCCTGAAAATAGTGTGGTGGAAAAAAGCA
TTCTGAACCCAGAGGCGGTAGGTGATGCACTTGAAAGAGTGGTGAACCTTGCGAATCCTCACACCAGTAATGTTGCGATG
GCAATTCCGACATCTATGGTCATTAATAAGATTATAGAAATGGATGCTGACATGACGGATGAAGAACGTGAAGTTCAAAT
TCGTATGGATGCTGAGCAATACATTCCGTTCCCATTAGATGAAGTGAGTCTTGATTTTGAAGTCCTGCCTGATCGATTAA
ATAATCCAAATCGGGTGAATGTACTTCTGGTTGCAACACGTACTGAAAATGTAGATACCCGTGTTGAAGTGTTGGAACTG
GCTGGCTTAACAGCAAAGAAAGCAGATGTTGAAAGCTATGCAATGGAACGTGCATTCTGCGTCTTTTCTGATACCTTGCC
GATGGGTGCCAATACTGTTGGGATATTAGATATTGGCCATACGATGACCACCTTGTCTGTTATGCAGAAAGGGAAAATTA
TCTACACGCGTGAGCAGGTTTTTGGTGGACGTCAACTGACACAAGATATTCAAAGTCGTTATGGTTTATCTTTTGAAGAA
GCCGGTCGTGCAAAAAAAGAAAGAACCTTACCTGATGATTACGATATTGAAGTGTTAGAGCCATTCTTGGATGCAGTGGT
ACAACAAGCAGCACGTTCACTACAGTTCTTCTTTTCATCATCTCAGTTTAATGAAATTGATCACATCTTGCTGGCAGGCG
GAAATGCGAATATTCCCGGTCTAGCGAAGTTATTACAACAAAAATTAGGTTACCGAGTAACGATTGCCAATCCATTTTTA
CAAATGGGGTTTTCTCCACAAATCGATATTAAAAAAATTGAAAATGATGCGTCCTCACTGATGGTTGCATGTGGTTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9GSK6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	87.784	100	0.878
pilM	Acinetobacter baumannii D1279779	87.216	100	0.872
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42