Detailed information NTG0893514

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: RJD36_RS00360
• Genome accession: NZ_CP136943
• Coordinates: 52934..53833 (+)
• Length: 299 a.a.
• NCBI ID: WP_317751340.1
• Uniprot ID: -
• Organism: Streptococcus pasteurianus strain WUSP082
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 47934..58833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD36_RS00335 (RJD36_00335)	-	49135..49584 (+)	450	WP_003062811.1	DUF523 domain-containing protein	-
RJD36_RS00340 (RJD36_00340)	purE	49584..50072 (+)	489	WP_003062813.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
RJD36_RS00345 (RJD36_00345)	purK	50059..51150 (+)	1092	WP_003062815.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
RJD36_RS00350 (RJD36_00350)	-	51170..51394 (+)	225	WP_003062817.1	hypothetical protein	-
RJD36_RS00355 (RJD36_00355)	purB	51484..52782 (+)	1299	WP_003062820.1	adenylosuccinate lyase	-
RJD36_RS00360 (RJD36_00360)	comR	52934..53833 (+)	900	WP_317751340.1	helix-turn-helix domain-containing protein	Regulator
RJD36_RS00370 (RJD36_00370)	-	54877..55308 (+)	432	WP_003062824.1	low molecular weight protein-tyrosine-phosphatase	-
RJD36_RS00375 (RJD36_00375)	-	55328..55708 (+)	381	WP_048791387.1	MORN repeat-containing protein	-
RJD36_RS00380 (RJD36_00380)	-	55705..57498 (+)	1794	WP_003062827.1	acyltransferase family protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 34933.10 Da
• Isoelectric Point: 4.9515

>NTDB_id=893514 RJD36_RS00360 WP_317751340.1 52934..53833(+) (comR) [Streptococcus pasteurianus strain WUSP082]
MEKFGIKVRALREKKGISREEFCGDETELSMRQLARIEKGQSVPTLNKVGYIAKVLGVTIGELTDGKNLELSTRYKELKY
LLLRTPTYGDEERLKRQTSYFDEISEKYYEVIPEEERLIIDCLQSKLDVHFSDDVNFGEGILNDYFDQVIRKKNFQINDL
VLIDLYFACLASAKSFVGIYSLDLYDKLMECLLDQENLSPETSLILNNVLLNNVDLVLRFHRESFMKRIIIKSDTIMTSV
HDFQRRPVLSLVEWKYYLQFKKDFLAAQKSYSNAILFANLIGDTYLENKLIEEWNNDTT

Nucleotide

• Length: 900 bp

>NTDB_id=893514 RJD36_RS00360 WP_317751340.1 52934..53833(+) (comR) [Streptococcus pasteurianus strain WUSP082]
TTGGAAAAGTTTGGGATTAAAGTACGTGCATTAAGAGAGAAAAAGGGAATTTCACGTGAGGAATTCTGTGGTGATGAAAC
AGAATTGTCTATGAGACAGCTAGCTAGAATTGAAAAAGGACAATCTGTCCCGACTCTTAATAAGGTGGGATATATTGCAA
AAGTATTGGGAGTAACCATTGGTGAGTTAACTGATGGTAAAAATTTAGAACTTTCCACTAGGTATAAGGAGTTAAAGTAT
TTATTATTACGAACACCGACCTATGGGGATGAGGAACGTCTTAAGAGACAAACTTCATATTTTGATGAAATTTCGGAAAA
GTACTATGAAGTTATACCTGAAGAAGAACGTTTAATTATTGATTGTTTACAATCGAAGCTTGATGTTCATTTCAGTGATG
ATGTTAATTTTGGTGAAGGAATTTTAAATGATTACTTTGACCAAGTTATACGAAAGAAGAACTTTCAAATTAATGATTTA
GTTTTGATAGATTTATATTTTGCTTGCCTTGCTTCTGCTAAATCGTTTGTGGGAATCTATAGCTTAGATTTGTATGATAA
ATTAATGGAGTGTTTACTAGATCAAGAAAATCTTTCACCAGAAACTTCTTTGATTTTAAATAATGTTTTGTTAAATAATG
TAGATTTGGTTTTACGATTCCATAGAGAATCTTTTATGAAACGAATTATTATAAAAAGTGACACTATCATGACAAGTGTT
CATGATTTTCAAAGACGTCCAGTTTTAAGTTTAGTTGAGTGGAAATATTATTTACAATTTAAAAAAGATTTTTTAGCGGC
ACAAAAATCTTACTCCAATGCTATTTTATTTGCTAACTTAATTGGAGATACTTATTTGGAAAATAAGTTAATAGAAGAAT
GGAATAATGACACAACATGA

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (74-294)

• Helix-turn-helix (HTH_3) (8-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	71.08	95.987	0.682
comR	Streptococcus mutans UA159	54.181	100	0.542
comR	Streptococcus pyogenes MGAS8232	48.667	100	0.488
comR	Streptococcus pyogenes MGAS315	46.309	99.666	0.462
comR	Streptococcus suis P1/7	39.933	99.666	0.398
comR	Streptococcus suis 05ZYH33	39.933	99.666	0.398
comR	Streptococcus suis D9	38	100	0.381