Detailed information NTG0893115

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: R0134_RS01470
• Genome accession: NZ_CP136856
• Coordinates: 318826..319923 (+)
• Length: 365 a.a.
• NCBI ID: WP_319783148.1
• Uniprot ID: -
• Organism: Oceanisphaera sp. IT1-181
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 313826..324923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R0134_RS01450	trkA	314365..315741 (-)	1377	WP_319783144.1	Trk system potassium transporter TrkA	-
R0134_RS01455	rsmB	315738..317045 (-)	1308	WP_319783145.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
R0134_RS01460	fmt	317124..318101 (-)	978	WP_319783146.1	methionyl-tRNA formyltransferase	-
R0134_RS01465	def	318111..318632 (-)	522	WP_319783147.1	peptide deformylase	-
R0134_RS01470	dprA	318826..319923 (+)	1098	WP_319783148.1	DNA-processing protein DprA	Machinery gene
R0134_RS01475	-	319926..320399 (+)	474	WP_319783149.1	DUF494 family protein	-
R0134_RS01480	-	320447..321016 (+)	570	WP_319783150.1	type I DNA topoisomerase	-
R0134_RS01485	-	321063..321626 (+)	564	WP_319783151.1	Sua5/YciO/YrdC/YwlC family protein	-
R0134_RS01490	hemF	321683..322591 (+)	909	WP_319783152.1	oxygen-dependent coproporphyrinogen oxidase	-
R0134_RS01495	hdfR	322588..323442 (-)	855	WP_319783153.1	HTH-type transcriptional regulator HdfR	-
R0134_RS01500	aroE	323604..324428 (+)	825	WP_319783154.1	shikimate dehydrogenase	-
R0134_RS01505	-	324440..324700 (+)	261	WP_319783155.1	DUF1488 domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 39433.56 Da
• Isoelectric Point: 6.5717

>NTDB_id=893115 R0134_RS01470 WP_319783148.1 318826..319923(+) (dprA) [Oceanisphaera sp. IT1-181]
MTASRLTQHPLLPWLALQHTHGIGPVRALKLYQTLGEHWYLPENLQQTKLSAEQLSQLQTAHFELLEPILTWQQAASNRH
IITWDNPDYPAQLKAIPAAPLILFVEGELNALTRPQIAVVGSRHPSYVGKENTKTLIPALVEAGAIITSGLALGIDGLSH
QAALDAGGISLGVLGSGLAKVYPKRHLSLATELIASGGALISECYPWIGPLAHHFPRRNRIISGLSLGVLVMEAAERSGS
LITARYALEQGREVFAIPGAWQNPLAWGCNQLIQQGAKLVLSANDILEELNVFSVAEVKVLAANSGELLPYPELLDNVGL
EATALDVIVTRCQQPVQEVLIRLVELELAGWVASVPGGYVRARRG

Nucleotide

• Length: 1098 bp

>NTDB_id=893115 R0134_RS01470 WP_319783148.1 318826..319923(+) (dprA) [Oceanisphaera sp. IT1-181]
ATGACGGCATCAAGGTTAACACAACACCCCCTATTGCCTTGGTTGGCTCTGCAGCACACTCACGGCATAGGTCCGGTGCG
CGCCCTTAAGCTCTACCAAACCTTAGGCGAGCATTGGTATCTGCCAGAAAATCTTCAGCAAACCAAATTAAGCGCCGAGC
AATTAAGCCAGTTACAAACTGCGCACTTTGAGCTACTTGAACCCATATTGACGTGGCAGCAAGCGGCCTCCAACCGCCAT
ATTATCACTTGGGATAATCCCGATTATCCGGCGCAACTAAAAGCCATACCGGCGGCACCCTTAATATTATTTGTGGAAGG
CGAGCTTAATGCTTTAACTCGACCGCAGATTGCAGTCGTTGGCAGTCGTCATCCCTCTTATGTGGGCAAAGAAAACACCA
AAACTTTGATCCCGGCCTTGGTTGAAGCCGGCGCCATTATCACCTCTGGTCTAGCACTCGGCATCGATGGGCTTAGCCAT
CAAGCAGCCTTAGACGCGGGCGGCATTAGCTTAGGCGTGTTGGGCTCGGGCTTAGCTAAGGTGTATCCCAAGCGCCACCT
AAGCTTGGCCACCGAATTAATAGCGTCGGGAGGTGCCTTAATCTCTGAATGTTATCCTTGGATAGGGCCGCTGGCGCATC
ACTTTCCACGGCGTAATCGCATTATCAGCGGCTTAAGTTTAGGGGTGTTAGTCATGGAAGCGGCCGAGCGTAGTGGCTCG
CTGATTACGGCGCGTTACGCGCTGGAGCAAGGGCGGGAGGTGTTTGCCATTCCGGGGGCTTGGCAAAATCCGTTGGCGTG
GGGCTGCAATCAGCTGATCCAGCAAGGAGCTAAATTAGTATTAAGTGCCAATGACATATTAGAAGAGCTAAATGTATTTT
CAGTGGCAGAGGTCAAAGTTCTTGCTGCAAATTCGGGCGAATTATTGCCTTATCCGGAGTTGTTGGATAACGTAGGACTA
GAGGCAACGGCGTTAGATGTGATTGTAACCCGTTGTCAGCAGCCGGTGCAGGAAGTGCTTATTCGGTTGGTCGAACTGGA
GTTGGCTGGCTGGGTGGCATCTGTACCTGGGGGTTATGTCAGAGCGAGAAGGGGATGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (78-281)

• DprA winged helix domain (DprA_WH) (313-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio campbellii strain DS40M4	50.413	99.452	0.501
dprA	Vibrio cholerae strain A1552	48.276	100	0.499
dprA	Legionella pneumophila strain ERS1305867	44.568	98.356	0.438
dprA	Acinetobacter baylyi ADP1	38.727	100	0.4
dprA	Glaesserella parasuis strain SC1401	41.888	92.877	0.389
dprA	Neisseria meningitidis strain C311	34.889	100	0.389
dprA	Neisseria meningitidis MC58	34.889	100	0.389