Detailed information NTG0884982

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RMQ61_RS05490
• Genome accession: NZ_CP135090
• Coordinates: 1097593..1098435 (+)
• Length: 280 a.a.
• NCBI ID: WP_313926583.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID48908
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1092593..1103435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMQ61_RS05460 (RMQ61_05465)	-	1093430..1094203 (+)	774	WP_313921376.1	ribonuclease HII	-
RMQ61_RS05465 (RMQ61_05470)	-	1094206..1095216 (+)	1011	WP_313921377.1	YdcF family protein	-
RMQ61_RS05470 (RMQ61_05475)	-	1095249..1095899 (-)	651	WP_313921378.1	hemolysin III family protein	-
RMQ61_RS05475 (RMQ61_05480)	-	1095889..1096440 (-)	552	WP_313921379.1	DUF1836 domain-containing protein	-
RMQ61_RS05480 (RMQ61_05485)	-	1096537..1096848 (-)	312	WP_014637902.1	rhodanese-like domain-containing protein	-
RMQ61_RS05485 (RMQ61_05490)	-	1096977..1097534 (+)	558	WP_313921380.1	sugar O-acetyltransferase	-
RMQ61_RS05490 (RMQ61_05495)	dprA	1097593..1098435 (+)	843	WP_313926583.1	DNA-processing protein DprA	Machinery gene
RMQ61_RS05495 (RMQ61_05500)	topA	1098528..1100621 (+)	2094	WP_044769796.1	type I DNA topoisomerase	-
RMQ61_RS05500 (RMQ61_05505)	-	1101243..1102406 (-)	1164	WP_313926582.1	IS30 family transposase	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31380.43 Da
• Isoelectric Point: 8.6600

>NTDB_id=884982 RMQ61_RS05490 WP_313926583.1 1097593..1098435(+) (dprA) [Streptococcus suis strain ID48908]
MNNFELFKWKKAGLTNLNINKVLAYQERFGKKLSLRNIAVVSECKKPILFMENYKNLDIKACREEFNKFPSFSILDDVYP
LALKQIYNPPVLMFYQGDLGLLEKSKLAIVGTRNASKNGIQSVQKIIKELNNRFVIVSGLARGIDTAAHIASLKNGGQTI
AVIGTGLDIVYPKENRELQTYIGKHHLVLTEYEPDAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGR
EVYAIPGSIMDGKSDGCHHLIQEGAKCVTSGLDIISEYQF

Nucleotide

• Length: 843 bp

>NTDB_id=884982 RMQ61_RS05490 WP_313926583.1 1097593..1098435(+) (dprA) [Streptococcus suis strain ID48908]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGCTTGACCAATCTTAATATAAATAAAGTGTTGGCTTATCAGGA
AAGATTTGGAAAAAAACTATCCCTGCGCAATATCGCTGTCGTATCCGAATGCAAAAAACCTATTCTCTTTATGGAGAATT
ATAAAAATTTGGATATCAAAGCTTGTCGAGAGGAATTTAATAAGTTTCCATCCTTTTCAATTTTGGATGACGTCTATCCA
TTAGCATTGAAGCAAATCTACAACCCTCCTGTCCTCATGTTTTATCAGGGAGATTTGGGATTGCTAGAAAAATCCAAATT
AGCTATCGTTGGAACTCGTAATGCCAGTAAAAATGGCATACAGTCTGTTCAGAAAATTATCAAGGAACTCAACAATCGCT
TTGTCATTGTTAGTGGTCTGGCTAGAGGAATTGACACTGCAGCCCATATTGCCAGCCTGAAAAATGGTGGACAGACCATT
GCCGTTATTGGAACAGGCTTGGACATAGTCTATCCAAAAGAAAATAGGGAATTGCAGACCTACATTGGCAAACATCATTT
AGTTCTAACTGAATATGAACCAGATGCCCAGCCCCTAAAATACCATTTTCCAGAACGTAATCGGATCATAGCCGGTTTGG
TAGAAGGGTTGGTGGTTTGCGAGGCCAAAATGCGGTCAGGTAGCCTGATTACCTGTGAACGAGCCTTGGAAGAAGGAAGA
GAAGTCTATGCTATTCCAGGTTCCATTATGGACGGAAAATCAGATGGTTGTCATCATCTGATTCAAGAGGGAGCAAAGTG
CGTTACATCAGGCTTGGACATCATTTCTGAGTATCAATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-60)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	70.714	100	0.707
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.214	100	0.632
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.214	100	0.632
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.214	100	0.632
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.214	100	0.632
dprA/cilB/dalA	Streptococcus mitis SK321	62.857	100	0.629
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.5	100	0.625
dprA	Lactococcus lactis subsp. cremoris KW2	60.714	100	0.607
dprA	Bacillus subtilis subsp. subtilis str. 168	48.649	79.286	0.386
dprA	Vibrio campbellii strain DS40M4	36.86	100	0.386
dprA	Legionella pneumophila strain ERS1305867	41.296	88.214	0.364