Detailed information NTG0884877

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RMP67_RS05650
• Genome accession: NZ_CP135087
• Coordinates: 1123209..1124051 (+)
• Length: 280 a.a.
• NCBI ID: WP_313921381.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID26102
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1118209..1129051

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMP67_RS05620 (RMP67_05620)	-	1119046..1119819 (+)	774	WP_313921376.1	ribonuclease HII	-
RMP67_RS05625 (RMP67_05625)	-	1119822..1120832 (+)	1011	WP_313921377.1	YdcF family protein	-
RMP67_RS05630 (RMP67_05630)	-	1120865..1121515 (-)	651	WP_313921378.1	hemolysin III family protein	-
RMP67_RS05635 (RMP67_05635)	-	1121505..1122056 (-)	552	WP_313921379.1	DUF1836 domain-containing protein	-
RMP67_RS05640 (RMP67_05640)	-	1122153..1122464 (-)	312	WP_014637902.1	rhodanese-like domain-containing protein	-
RMP67_RS05645 (RMP67_05645)	-	1122593..1123150 (+)	558	WP_313921380.1	sugar O-acetyltransferase	-
RMP67_RS05650 (RMP67_05650)	dprA	1123209..1124051 (+)	843	WP_313921381.1	DNA-processing protein DprA	Machinery gene
RMP67_RS05655 (RMP67_05655)	topA	1124144..1126237 (+)	2094	WP_313921383.1	type I DNA topoisomerase	-
RMP67_RS05660 (RMP67_05660)	-	1126859..1128022 (-)	1164	WP_313919057.1	IS30 family transposase	-
RMP67_RS05665 (RMP67_05665)	rplJ	1128357..1128851 (+)	495	WP_002936486.1	50S ribosomal protein L10	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31218.28 Da
• Isoelectric Point: 8.7434

>NTDB_id=884877 RMP67_RS05650 WP_313921381.1 1123209..1124051(+) (dprA) [Streptococcus suis strain ID26102]
MNNFELFKWKKAGLTNLNINKVLAYQERFGKKLSLRNIAVVSECKKPILFMENYKNLDIKACREEFNKFPSFSILDDVYP
LALKQIYNPPVLMFYQGDLGLLEKSKLAIVGTRNASKNGIQSVQKIIKELNNRFVIVSGLARGIDTAAHIASLKNGGQTI
AVIGTGLDIVYPKENRELQTYIGKHHLVLTEYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGR
EVCAIPGSILDGKSDGCHHLIQEGAKCVTSGLDIISEYQF

Nucleotide

• Length: 843 bp

>NTDB_id=884877 RMP67_RS05650 WP_313921381.1 1123209..1124051(+) (dprA) [Streptococcus suis strain ID26102]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGCTTGACCAATCTTAATATAAATAAAGTGTTGGCTTATCAGGA
AAGATTTGGAAAAAAACTATCCCTGCGCAATATCGCTGTCGTATCCGAATGCAAAAAACCTATTCTCTTTATGGAGAATT
ATAAAAATTTGGATATCAAAGCTTGTCGAGAGGAATTTAATAAGTTTCCATCCTTTTCAATTTTGGATGACGTCTATCCA
TTAGCATTGAAGCAAATCTACAACCCTCCTGTCCTCATGTTTTATCAGGGAGATTTGGGATTGCTAGAAAAATCCAAATT
AGCTATCGTTGGAACTCGTAATGCCAGTAAAAATGGCATACAGTCTGTTCAGAAAATTATCAAGGAACTCAACAATCGCT
TTGTCATTGTTAGTGGTCTGGCTAGAGGAATTGACACTGCAGCCCATATTGCCAGCCTGAAAAATGGTGGACAGACCATT
GCCGTTATTGGAACAGGCTTGGACATAGTCTATCCAAAAGAAAATAGGGAATTGCAGACCTATATTGGAAAACACCATTT
GGTGCTGACAGAGTATGAAGCTGGTGCTCAGCCACTCAAATACCATTTTCCAGAACGCAATCGCATTATAGCTGGTTTGG
TGGAAGGATTGGTAGTCTGCGAAGCTAAAATGCGGTCTGGTAGCTTGATTACCTGCGAACGTGCCTTGGAAGAAGGCAGA
GAAGTCTGTGCCATACCTGGTTCCATTTTGGATGGGAAATCAGATGGCTGTCATCATCTGATTCAAGAGGGAGCAAAGTG
CGTTACATCAGGCTTGGACATCATTTCTGAGTATCAATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-60)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	71.429	100	0.714
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.571	100	0.636
dprA/cilB/dalA	Streptococcus mitis SK321	63.214	100	0.632
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.857	100	0.629
dprA	Lactococcus lactis subsp. cremoris KW2	61.071	100	0.611
dprA	Bacillus subtilis subsp. subtilis str. 168	48.198	79.286	0.382
dprA	Legionella pneumophila strain ERS1305867	39.925	95.714	0.382
dprA	Vibrio campbellii strain DS40M4	36.177	100	0.379