Detailed information NTG0884708

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: RMQ62_RS01655
• Genome accession: NZ_CP135065
• Coordinates: 343054..343725 (-)
• Length: 223 a.a.
• NCBI ID: WP_029186691.1
• Uniprot ID: A0AB33UFN5
• Organism: Streptococcus suis strain ID24665
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 338054..348725

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMQ62_RS01630 (RMQ62_01630)	-	338162..338752 (-)	591	WP_024376492.1	class I SAM-dependent methyltransferase	-
RMQ62_RS01635 (RMQ62_01635)	coaA	338861..339781 (+)	921	WP_313680854.1	type I pantothenate kinase	-
RMQ62_RS01640 (RMQ62_01640)	rpsT	339840..340088 (+)	249	WP_012027069.1	30S ribosomal protein S20	-
RMQ62_RS01645 (RMQ62_01645)	-	340352..341581 (-)	1230	WP_105136222.1	transglutaminase domain-containing protein	-
RMQ62_RS01650 (RMQ62_01650)	ciaH	341682..343061 (-)	1380	WP_105135003.1	cell wall metabolism sensor histidine kinase WalK	Regulator
RMQ62_RS01655 (RMQ62_01655)	ciaR	343054..343725 (-)	672	WP_029186691.1	response regulator transcription factor	Regulator
RMQ62_RS01660 (RMQ62_01660)	-	343917..344378 (-)	462	WP_105242436.1	hypothetical protein	-
RMQ62_RS01665 (RMQ62_01665)	phoU	344544..345200 (-)	657	WP_002937611.1	phosphate signaling complex protein PhoU	-
RMQ62_RS01670 (RMQ62_01670)	pstB	345229..345987 (-)	759	WP_002937614.1	phosphate ABC transporter ATP-binding protein PstB	-
RMQ62_RS01675 (RMQ62_01675)	pstB	345999..346802 (-)	804	WP_002940866.1	phosphate ABC transporter ATP-binding protein PstB	-
RMQ62_RS01680 (RMQ62_01680)	pstA	346827..347714 (-)	888	WP_014635996.1	phosphate ABC transporter permease PstA	-
RMQ62_RS01685 (RMQ62_01685)	pstC	347704..348621 (-)	918	WP_002937619.1	phosphate ABC transporter permease subunit PstC	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 25227.85 Da
• Isoelectric Point: 4.2183

>NTDB_id=884708 RMQ62_RS01655 WP_029186691.1 343054..343725(-) (ciaR) [Streptococcus suis strain ID24665]
MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGVYEAETGVYDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTA
KESLEDKGHGFELGADDYLTKPFYLEELKMRIQALLKRAGKFNENTLIFGDVTVDLSTNSTTVNGEEVELLGKEFDLLVY
FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGYILKNA

Nucleotide

• Length: 672 bp

>NTDB_id=884708 RMQ62_RS01655 WP_029186691.1 343054..343725(-) (ciaR) [Streptococcus suis strain ID24665]
ATGATTAAAATATTGTTAGTGGAAGATGATTTAAGCCTATCAAATTCTGTTTTCGATTTCTTAGATGATTTTGCGGATGT
TATGCAGGTTTTTGATGGTGAAGAGGGCGTTTACGAGGCGGAAACAGGCGTTTATGATTTGATTCTTTTGGATTTGATGT
TGCCTGAAAAAGATGGCTTCCAAGTTTTGAAAGAGTTACGTGAAAAAGGTGTTACGACACCTGTTCTGATTACAACAGCC
AAGGAAAGTCTAGAGGATAAAGGCCATGGTTTTGAATTGGGAGCTGATGACTACTTGACAAAACCGTTTTATTTAGAAGA
ATTGAAGATGCGAATTCAAGCTCTATTAAAACGAGCGGGCAAGTTTAATGAAAACACACTAATTTTTGGAGACGTGACTG
TTGACTTATCGACAAACTCCACAACTGTAAATGGCGAAGAAGTCGAATTGCTAGGAAAAGAATTCGATCTACTAGTCTAC
TTCTTGCAAAATCAAAATGTTATCTTACCAAAAACTCAAATTTTTGACCGTATTTGGGGATTTGACAGTGACACTACTAT
TTCAGTAGTAGAAGTATATGTTTCTAAAATTAGGAAAAAGTTGAAAGGAACGACCTTTGGGGAAAATCTTCAAACCCTGC
GTAGTGTCGGGTACATTCTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

• Response regulator receiver domain (Response_reg) (4-112)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	89.238	100	0.892
ciaR	Streptococcus pneumoniae Rx1	87.892	100	0.879
ciaR	Streptococcus pneumoniae D39	87.892	100	0.879
ciaR	Streptococcus pneumoniae R6	87.892	100	0.879
ciaR	Streptococcus pneumoniae TIGR4	87.892	100	0.879
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.496	100	0.39
vicR	Streptococcus mutans UA159	35.897	100	0.377