Detailed information NTG0884706

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RMQ62_RS01175
• Genome accession: NZ_CP135065
• Coordinates: 243944..244786 (-)
• Length: 280 a.a.
• NCBI ID: WP_313680900.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID24665
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 238944..249786

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMQ62_RS01155 (RMQ62_01155)	-	239391..240140 (-)	750	WP_105184246.1	HAD family hydrolase	-
RMQ62_RS01160 (RMQ62_01160)	rplL	240265..240630 (-)	366	WP_002936483.1	50S ribosomal protein L7/L12	-
RMQ62_RS01165 (RMQ62_01165)	rplJ	240696..241190 (-)	495	WP_105184245.1	50S ribosomal protein L10	-
RMQ62_RS01170 (RMQ62_01170)	topA	241758..243851 (-)	2094	WP_313680901.1	type I DNA topoisomerase	-
RMQ62_RS01175 (RMQ62_01175)	dprA	243944..244786 (-)	843	WP_313680900.1	DNA-processing protein DprA	Machinery gene
RMQ62_RS01180 (RMQ62_01180)	-	244847..245404 (-)	558	WP_313680899.1	sugar O-acetyltransferase	-
RMQ62_RS01185 (RMQ62_01185)	-	245534..245845 (+)	312	WP_313680898.1	rhodanese-like domain-containing protein	-
RMQ62_RS01190 (RMQ62_01190)	-	246087..246533 (+)	447	WP_313680897.1	DUF1836 domain-containing protein	-
RMQ62_RS01195 (RMQ62_01195)	-	246523..247173 (+)	651	WP_313680896.1	hemolysin III family protein	-
RMQ62_RS01200 (RMQ62_01200)	-	247208..248218 (-)	1011	WP_313680895.1	YdcF family protein	-
RMQ62_RS01205 (RMQ62_01205)	-	248221..248994 (-)	774	WP_313680894.1	ribonuclease HII	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31243.12 Da
• Isoelectric Point: 8.6515

>NTDB_id=884706 RMQ62_RS01175 WP_313680900.1 243944..244786(-) (dprA) [Streptococcus suis strain ID24665]
MNNFELFKWKKAGLTNLNINKVLAYQEKHGKKLTLRNVAVVSECKNPVLFMENYKNLDTKACREEFNKYPSFSILDDIYP
LALKQIYNPPVLLFYQGDLELLEKSKLAVVGTRNASKNGIQSVQKIIKELNNRFVIVSGLARGIDTAAHIASLKNGGQTI
AVIGTGLDKVYPKENKDLQTYIGKHHLVLTEYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGR
EVYAIPGSILDGKSDGCHHLIQEGAKCVTSGLDIISEYQF

Nucleotide

• Length: 843 bp

>NTDB_id=884706 RMQ62_RS01175 WP_313680900.1 243944..244786(-) (dprA) [Streptococcus suis strain ID24665]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGTTTGACCAATCTTAATATTAATAAAGTTTTGGCCTATCAAGA
AAAACACGGTAAAAAATTGACCTTACGTAATGTCGCTGTAGTGTCTGAATGTAAAAATCCAGTGCTATTCATGGAAAATT
ATAAGAATCTAGATACAAAAGCCTGTCGCGAGGAATTTAATAAGTATCCATCATTTTCAATTTTAGATGATATCTATCCT
TTGGCGCTCAAACAGATTTACAATCCACCTGTACTTTTGTTTTATCAAGGGGATTTAGAATTGCTAGAAAAATCAAAGCT
GGCAGTTGTTGGTACACGAAATGCCAGTAAAAATGGTATCCAATCTGTTCAGAAAATTATCAAAGAACTCAACAATCGTT
TTGTCATTGTCAGTGGTTTGGCAAGAGGAATTGATACGGCTGCCCACATCGCCAGTTTGAAAAATGGAGGCCAAACCATT
GCTGTAATCGGAACAGGTTTGGATAAGGTCTATCCCAAAGAAAACAAGGACTTGCAGACCTACATTGGCAAACACCATCT
GGTACTGACAGAGTATGAAGCTGGTGCTCAGCCACTCAAATACCATTTCCCAGAACGTAACCGCATCATTGCTGGGTTGG
TAGAAGGTCTGGTGGTTTGCGAGGCAAAAATGCGGTCTGGTAGCTTGATTACTTGCGAACGTGCCTTGGAAGAAGGAAGA
GAAGTCTATGCTATTCCAGGTTCTATTTTAGATGGAAAATCAGATGGCTGTCATCATTTGATACAAGAGGGGGCAAAGTG
CGTTACATCAGGCTTGGACATCATTTCTGAGTATCAATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	70.357	100	0.704
dprA/cilB/dalA	Streptococcus mitis SK321	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae D39	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae R6	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	64.286	100	0.643
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	63.571	100	0.636
dprA	Lactococcus lactis subsp. cremoris KW2	60	100	0.6
dprA	Legionella pneumophila strain ERS1305867	41.296	88.214	0.364
dprA	Bacillus subtilis subsp. subtilis str. 168	50.249	71.786	0.361