Detailed information NTG0884539

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AADH43_RS10380
• Genome accession: NZ_CP151155
• Coordinates: 2212753..2214042 (-)
• Length: 429 a.a.
• NCBI ID: WP_043043278.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain vp-pir-201806
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2207753..2219042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AADH43_RS10360 (AADH43_10360)	bioA	2208233..2209513 (+)	1281	WP_021822274.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
AADH43_RS10365 (AADH43_10365)	-	2209583..2209849 (-)	267	WP_021449297.1	DksA/TraR family C4-type zinc finger protein	-
AADH43_RS10370 (AADH43_10370)	-	2210418..2210984 (-)	567	WP_236575998.1	ATPase	-
AADH43_RS10375 (AADH43_10375)	serS	2211354..2212661 (-)	1308	WP_005495761.1	serine--tRNA ligase	-
AADH43_RS10380 (AADH43_10380)	rarA	2212753..2214042 (-)	1290	WP_043043278.1	replication-associated recombination protein A	Machinery gene
AADH43_RS10385 (AADH43_10385)	lolA	2214109..2214735 (-)	627	WP_023585423.1	outer membrane lipoprotein chaperone LolA	-
AADH43_RS10390 (AADH43_10390)	-	2214810..2217896 (-)	3087	WP_025789117.1	DNA translocase FtsK	-
AADH43_RS10395 (AADH43_10395)	lrp	2218049..2218543 (-)	495	WP_005378234.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47621.81 Da
• Isoelectric Point: 5.8544

>NTDB_id=884539 AADH43_RS10380 WP_043043278.1 2212753..2214042(-) (rarA) [Vibrio parahaemolyticus strain vp-pir-201806]
MRPQTIEQYIGQQHILGPGKPLRRALEAGHVHSMILWGPPGTGKTTLAEVAANYANAEVERVSAVTSGVKEIRAAIEKAR
ENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLTSLDKEEISLALNQAIN
DKERGLGNTPANFADNVLDRLAELVNGDARMSLNYLELLYDMAEENDQGEKEITLKLLAEVAGEKVSRFDNKGDIWYDLI
SAVHKSIRGSNPDAALYWAARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWDCFTRVGPAEGERAIAQAIVY
LACAPKSNAVYVAWKQALTDAHNLPEYEVPHHLRNAPTSLMKDMGYGAEYRYAHDEPGAYAAGEQYLPPEMADRKYYQPT
NRGLETKIGEKLDYLAKLDANSQQKRYEK

Nucleotide

• Length: 1290 bp

>NTDB_id=884539 AADH43_RS10380 WP_043043278.1 2212753..2214042(-) (rarA) [Vibrio parahaemolyticus strain vp-pir-201806]
ATGAGACCGCAAACTATTGAGCAGTACATCGGTCAGCAACACATTCTTGGCCCGGGTAAACCCCTGCGTCGCGCGTTAGA
GGCTGGCCATGTCCACTCAATGATCCTTTGGGGGCCTCCTGGTACAGGTAAAACCACGTTAGCGGAAGTCGCTGCTAATT
ACGCCAATGCGGAAGTTGAACGCGTGTCTGCGGTGACGTCCGGTGTGAAAGAGATTCGTGCTGCAATCGAAAAAGCGCGC
GAGAACAAAATGGCGGGTCGCCGCACCATCTTGTTTGTGGATGAGGTCCATCGCTTCAACAAATCGCAACAAGATGCGTT
CTTACCACATATTGAAGATGGAACCGTAACGTTTATTGGCGCAACGACAGAGAACCCGTCTTTCGAACTGAACAACGCAT
TGTTGTCTCGTGCTCGAGTCTACAAGCTGACTTCACTGGATAAAGAAGAGATCTCACTCGCACTAAATCAAGCGATTAAC
GACAAAGAACGAGGGCTGGGCAATACGCCAGCGAACTTTGCTGATAATGTGTTAGACCGTCTAGCCGAGTTGGTGAACGG
TGATGCTCGCATGTCTCTTAACTACCTTGAGCTTCTCTACGATATGGCAGAAGAGAATGATCAAGGTGAAAAAGAGATAA
CACTCAAACTGCTTGCTGAAGTAGCCGGGGAGAAAGTCTCTCGCTTCGATAATAAAGGCGACATTTGGTACGATTTGATC
TCCGCTGTGCACAAATCTATTCGTGGATCAAACCCAGATGCCGCTTTGTATTGGGCTGCTCGTATGATAGCTGCAGGTTG
TGATCCACTTTACATTGCCCGCCGATTACTTGCGATAGCATCGGAAGATGTCGGCAATGCGGACCCTAGAGCCATGCAAG
TTGCACTCTCCGCGTGGGACTGTTTTACACGCGTTGGTCCAGCAGAAGGTGAGCGTGCGATTGCTCAAGCAATTGTTTAT
CTCGCGTGCGCTCCAAAGAGTAATGCCGTTTATGTTGCTTGGAAACAAGCGCTCACTGACGCACATAACTTGCCTGAATA
TGAAGTGCCGCATCACTTGCGTAATGCCCCCACCAGTCTGATGAAAGACATGGGCTATGGCGCAGAATATCGATATGCTC
ACGACGAGCCGGGTGCTTATGCAGCGGGTGAGCAATATTTGCCACCAGAAATGGCGGATCGTAAGTACTATCAGCCGACA
AATCGCGGTCTAGAAACCAAAATCGGCGAAAAGTTAGATTACTTGGCTAAATTAGACGCAAATAGCCAACAAAAGCGCTA
TGAAAAGTAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (169-248)

• MgsA AAA+ ATPase C terminal (MgsA_C) (249-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (34-139)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.474	97.436	0.385