Detailed information NTG0884538

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: Q9J89_RS01505
• Genome accession: NZ_CP135051
• Coordinates: 286811..287785 (+)
• Length: 324 a.a.
• NCBI ID: WP_002465784.1
• Uniprot ID: -
• Organism: Staphylococcus warneri strain TWSL_1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 281811..292785

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q9J89_RS01470	rpmG	282252..282401 (+)	150	WP_002451882.1	50S ribosomal protein L33	-
Q9J89_RS01475	-	282633..283187 (+)	555	WP_058710070.1	5-formyltetrahydrofolate cyclo-ligase	-
Q9J89_RS01480	-	283184..284638 (+)	1455	WP_107529357.1	rhomboid family intramembrane serine protease	-
Q9J89_RS01485	-	284628..284831 (+)	204	WP_002451885.1	YqgQ family protein	-
Q9J89_RS01490	-	284828..285814 (+)	987	WP_002465775.1	ROK family glucokinase	-
Q9J89_RS01495	-	285814..286137 (+)	324	WP_015364969.1	MTH1187 family thiamine-binding protein	-
Q9J89_RS01500	-	286141..286764 (+)	624	WP_002465751.1	MBL fold metallo-hydrolase	-
Q9J89_RS01505	comGA	286811..287785 (+)	975	WP_002465784.1	competence type IV pilus ATPase ComGA	Machinery gene
Q9J89_RS01510	comGB	287757..288824 (+)	1068	WP_107529356.1	competence type IV pilus assembly protein ComGB	-
Q9J89_RS01515	comGC	288837..289154 (+)	318	WP_002465742.1	competence type IV pilus major pilin ComGC	Machinery gene
Q9J89_RS01520	comGD	289132..289572 (+)	441	WP_145541292.1	competence type IV pilus minor pilin ComGD	Machinery gene
Q9J89_RS01525	-	289770..290267 (+)	498	WP_145541288.1	competence type IV pilus minor pilin ComGF	-
Q9J89_RS01530	-	290426..290944 (+)	519	WP_071561236.1	shikimate kinase	-
Q9J89_RS01535	gcvT	291116..292207 (+)	1092	WP_313795184.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37163.35 Da
• Isoelectric Point: 9.2695

>NTDB_id=884538 Q9J89_RS01505 WP_002465784.1 286811..287785(+) (comGA) [Staphylococcus warneri strain TWSL_1]
MKILFQEIINKAIVYKASDVHFIPMEHYVHIKFRVNDTLTSYETLDIGIYRKLLVFMKFQAGLDVSTQQIAQSGRYTYKL
RSVYYLRISTLPLSIGSESCVIRIVPQYFQNKKETYEFNDFKHLMNKKQGLLLFTGPTGSGKSTLMYQMVMYAQKELNLN
VISIEDPVEQILKGITQISVNTKAGITYASSFKAILRCDPDVILIGEIRDAEIAKYVFQASLSGHLVLSTLHANDCKGAL
LRLLEMGITIQELSQAINLISNQRLITTSSQRRQLVCELMFKNQINYFFEHNQTMPRSFKRLSSKLDDMTKEGIICETIA
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=884538 Q9J89_RS01505 WP_002465784.1 286811..287785(+) (comGA) [Staphylococcus warneri strain TWSL_1]
TTGAAGATATTATTTCAAGAAATAATTAATAAAGCTATAGTTTATAAAGCAAGTGATGTACATTTTATTCCAATGGAACA
TTATGTTCATATAAAATTCAGAGTGAATGATACTTTAACATCATATGAAACTCTTGATATCGGAATTTATCGTAAATTAC
TTGTTTTTATGAAATTTCAAGCAGGATTGGATGTGTCGACGCAGCAAATCGCTCAAAGTGGTCGTTACACATATAAATTA
AGATCAGTTTATTACTTACGTATTTCAACTCTCCCTTTATCAATCGGTAGTGAAAGTTGTGTAATTAGAATAGTGCCTCA
ATATTTTCAAAATAAAAAGGAAACTTATGAATTTAACGATTTTAAACATTTAATGAACAAGAAACAAGGATTATTGCTTT
TTACAGGACCAACTGGTTCAGGTAAAAGCACACTCATGTATCAAATGGTTATGTACGCGCAAAAAGAATTGAATCTCAAT
GTCATATCTATCGAAGACCCCGTAGAACAAATTTTAAAAGGTATTACTCAAATCTCAGTGAATACTAAAGCCGGTATTAC
TTATGCAAGTTCATTTAAAGCCATACTTCGGTGCGATCCAGATGTTATTTTGATTGGAGAAATCAGAGACGCTGAAATAG
CAAAATATGTGTTTCAAGCAAGCTTGAGTGGCCATTTAGTATTAAGTACATTACATGCTAATGATTGCAAAGGGGCGTTG
TTAAGATTATTAGAGATGGGTATTACGATTCAAGAACTATCACAAGCTATCAATTTAATATCTAACCAACGTTTAATAAC
CACTTCAAGCCAACGACGTCAATTAGTTTGTGAACTTATGTTCAAAAATCAAATCAATTACTTTTTTGAACATAATCAAA
CAATGCCTAGATCTTTTAAGCGATTATCTTCAAAACTAGATGATATGACTAAAGAGGGAATTATATGTGAAACAATTGCT
GATAAATATATTTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (8-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	74.383	100	0.744
comGA	Staphylococcus aureus N315	74.383	100	0.744