Detailed information NTG0875747

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: RG306_RS01655
• Genome accession: NZ_CP133666
• Coordinates: 359945..361003 (+)
• Length: 352 a.a.
• NCBI ID: WP_005034346.1
• Uniprot ID: N9CZM5
• Organism: Acinetobacter bereziniae strain UCO-553
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 354945..366003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RG306_RS01640 (RG306_01640)	mraY	355186..356304 (+)	1119	WP_004825397.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
RG306_RS01645 (RG306_01645)	-	356378..357181 (+)	804	WP_005034349.1	putative RNA methyltransferase	-
RG306_RS01650 (RG306_01650)	ponA	357241..359781 (-)	2541	WP_005034348.1	penicillin-binding protein PBP1a	-
RG306_RS01655 (RG306_01655)	comM	359945..361003 (+)	1059	WP_005034346.1	pilus assembly protein PilM	Machinery gene
RG306_RS01660 (RG306_01660)	pilN	361003..361644 (+)	642	WP_004825390.1	PilN domain-containing protein	Machinery gene
RG306_RS01665 (RG306_01665)	comO	361641..362393 (+)	753	WP_004825387.1	type 4a pilus biogenesis protein PilO	Machinery gene
RG306_RS01670 (RG306_01670)	comL	362390..362920 (+)	531	WP_005034344.1	pilus assembly protein PilP	Machinery gene
RG306_RS01675 (RG306_01675)	pilQ	362941..365112 (+)	2172	WP_005034341.1	type IV pilus secretin PilQ	Machinery gene
RG306_RS01680 (RG306_01680)	aroK	365149..365691 (+)	543	WP_004825383.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39076.76 Da
• Isoelectric Point: 4.5448

>NTDB_id=875747 RG306_RS01655 WP_005034346.1 359945..361003(+) (comM) [Acinetobacter bereziniae strain UCO-553]
MLRLYRKQNKGLVGVDISSTTVKILELSVKNGRYWVESYGLSPLIDGSVVEKNILNPEAVADALERAVNLANPQSQNVAV
AVPTSMVIHKIIEMDADMSDEEREVQIRMDAEQYIPFPLDEVSLDFEVLNDKLANPNRVNVLLVATRAENIESRVEVLEI
AGLSPKIADVESYAIERAFDVFSDTLPIGVNLVGILDIGHTMTTLSVMQKGKIIYTREQVFGGKQLTQDVQNRYGLSYEE
AGRAKKDRTLPDDFETEVLMPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTVANPFL
QMGFSPQIDLRKIENDAPSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=875747 RG306_RS01655 WP_005034346.1 359945..361003(+) (comM) [Acinetobacter bereziniae strain UCO-553]
GTGCTTAGACTATATCGTAAGCAAAATAAGGGGTTGGTAGGAGTAGATATTAGTTCTACTACTGTAAAAATTTTAGAGCT
CTCTGTTAAGAACGGTCGTTACTGGGTTGAAAGTTATGGATTAAGTCCGCTGATTGATGGGAGTGTGGTTGAAAAAAACA
TTCTCAATCCAGAAGCAGTTGCAGATGCATTAGAGCGAGCAGTCAATCTTGCTAACCCTCAATCGCAAAATGTGGCTGTT
GCTGTACCTACTTCTATGGTGATTCATAAAATCATAGAAATGGATGCAGATATGTCCGATGAGGAAAGAGAAGTCCAGAT
TCGAATGGATGCTGAACAATATATTCCTTTTCCTTTGGATGAAGTGAGCTTAGATTTTGAAGTATTGAATGATAAGTTAG
CCAATCCGAATCGAGTGAATGTACTTTTGGTGGCGACACGTGCTGAAAATATTGAGTCTCGTGTTGAAGTTCTGGAAATT
GCAGGCTTATCTCCTAAAATTGCAGATGTAGAAAGCTATGCCATAGAACGTGCATTCGATGTCTTTTCAGATACTTTACC
CATCGGGGTGAATCTTGTTGGGATCTTAGATATTGGTCACACCATGACCACATTGTCTGTGATGCAAAAAGGTAAGATTA
TTTACACGCGTGAGCAGGTGTTTGGGGGCAAACAACTGACACAAGATGTGCAAAATCGTTATGGTTTATCTTATGAGGAA
GCAGGTCGTGCCAAGAAAGACCGCACCTTACCCGATGATTTTGAAACTGAAGTGTTAATGCCGTTTTTAGAAGCGGTGGT
TCAGCAAGCAGCGCGTTCATTGCAATTCTTCTTCTCCTCCTCACAATTTAATGAGATTGATCATATTTTGCTGGCAGGTG
GAAATGCAAATATCCCAGGTTTGGCAAAATTATTACAACAAAAATTAGGCTATCGAGTCACTGTTGCAAATCCATTTTTA
CAAATGGGTTTTTCACCGCAAATTGACTTAAGAAAAATAGAAAATGATGCACCATCACTTATGGTTGCATGTGGCTTAGC
GTTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9CZM5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.659	100	0.847
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	43.38	100	0.437