Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   WKW51_RS08865 Genome accession   NZ_CP149800
Coordinates   1856712..1858973 (-) Length   753 a.a.
NCBI ID   WP_000166995.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain AB7276     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1851712..1863973
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKW51_RS08855 (WKW51_08855) adeA 1852267..1853457 (+) 1191 WP_001169090.1 multidrug efflux RND transporter periplasmic adaptor subunit AdeA -
  WKW51_RS08860 (WKW51_08860) adeB 1853454..1856564 (+) 3111 WP_000987595.1 multidrug efflux RND transporter permease subunit AdeB -
  WKW51_RS08865 (WKW51_08865) uvrA 1856712..1858973 (-) 2262 WP_000166995.1 excinuclease ABC subunit UvrA Machinery gene
  WKW51_RS08870 (WKW51_08870) - 1860278..1860568 (+) 291 WP_000794351.1 hypothetical protein -
  WKW51_RS08875 (WKW51_08875) - 1861058..1861591 (+) 534 WP_000731819.1 fimbrial protein -
  WKW51_RS08880 (WKW51_08880) - 1861679..1862413 (+) 735 WP_000774086.1 molecular chaperone -

Sequence

Protein


Download         Length: 753 a.a.        Molecular weight: 84670.11 Da        Isoelectric Point: 8.1050

>NTDB_id=875396 WKW51_RS08865 WP_000166995.1 1856712..1858973(-) (uvrA) [Acinetobacter baumannii strain AB7276]
MTKRTINIYGARQNNLKNISLKIPKHKIVVFTGVSGSGKSSLVFETIGAEAQRQINETQDSFVRNRLQHFGVTDVDKIEN
LNVPVIINQKPLTGNIRSTVATITDIYANLRLLFSRMGEPFVGYSNVFSFNHPNGMCPQCEGIGIEQTIDIYKILDLDKS
LNEEGAIDFPTYQPTAWRWTRYADSGYFDLDKKLKDYSEKEWDLFLYAPQHKPLNPTSKWRKTALYEGLIPRFERNFLKG
EAQERNRYRNKLERIITIKECSLCKGQRLNQKSLSCKINGKNIAECTALSVSRLLEFLESIKSKKFETVLHEIKNKLNNL
NLVGLSYLNLNRVSNTLSGGESQRIKMVKHLGNSLVDLLYIFDEPSIGLHPKDLDNIIKIIQKIRDKGNSVLLVEHDPDL
IRTADHVVDMGPLSGINGGEIIYQGTFEELKNSSGLTGAFFRRPNTYKKEPRMGNEWISIKNAHLFNLKNIDVDIPKNCL
TVITGVAGSGKSTLISKVLPQQYPETKVVDQSAITASIRSNLLTYLDLLDPIRQLFAKTNKVSAKLFSFNSEGACPQCKG
SGIERIELAFLDDVEMTCDVCHGSGYAPEVLKYLYKDKNIAEILKMTVAEASNFFEDQILQQQFNSLMSLGLDYIAIGQR
LNTFSGGERQRLKLTKQINETDNIFVLDEPSTGLHPSDTEKLISLLNNLVEKGNTVIVIEHNLDIISQADWIVDIGLLAG
DKGGELVFSGTVSGLLSAEKSLTGYYLKKYLEL

Nucleotide


Download         Length: 2262 bp        

>NTDB_id=875396 WKW51_RS08865 WP_000166995.1 1856712..1858973(-) (uvrA) [Acinetobacter baumannii strain AB7276]
ATGACTAAAAGAACAATAAATATTTATGGTGCCAGACAAAATAATCTTAAAAATATTTCATTGAAGATTCCTAAACATAA
AATCGTTGTCTTTACTGGAGTCTCTGGTTCAGGTAAATCTTCTTTAGTTTTCGAGACTATTGGCGCAGAAGCTCAAAGAC
AAATTAATGAAACTCAAGATAGTTTTGTACGTAATCGCTTGCAACATTTTGGTGTTACTGACGTTGATAAAATTGAAAAT
TTAAATGTACCTGTGATTATTAATCAAAAACCTTTAACGGGCAATATTCGCTCAACTGTTGCAACAATTACAGATATTTA
TGCCAATCTTCGCTTGTTATTTTCACGTATGGGTGAGCCGTTTGTTGGATACTCCAATGTCTTTTCTTTTAATCACCCAA
ATGGCATGTGTCCACAATGCGAAGGTATTGGAATCGAGCAAACAATTGATATTTACAAAATATTAGATTTAGATAAATCC
TTAAATGAAGAAGGTGCTATAGACTTCCCTACTTATCAACCTACAGCATGGCGTTGGACGCGATATGCAGATTCAGGTTA
CTTTGATTTAGATAAAAAATTAAAAGATTATAGTGAAAAAGAATGGGACTTATTTTTGTATGCTCCTCAGCACAAGCCTT
TAAACCCGACAAGTAAATGGAGAAAAACCGCACTTTATGAAGGACTAATTCCCAGATTTGAGCGTAACTTTTTAAAAGGT
GAAGCACAGGAAAGAAATCGTTATAGAAATAAACTTGAGCGAATTATTACAATCAAAGAATGCTCCTTATGTAAGGGACA
ACGGCTAAATCAAAAATCCTTATCTTGTAAGATTAACGGTAAAAATATTGCGGAATGTACGGCCCTATCCGTATCAAGGC
TTTTAGAGTTTCTCGAATCGATAAAAAGTAAAAAATTTGAAACCGTTTTGCACGAAATAAAAAATAAACTCAATAACTTA
AATCTCGTTGGACTCAGCTATTTAAACCTTAACCGTGTCAGCAATACATTGTCGGGAGGAGAATCACAACGAATTAAAAT
GGTTAAACATTTGGGTAATAGTCTGGTTGATCTACTCTATATTTTTGATGAACCAAGTATTGGCCTGCACCCCAAAGATT
TAGATAATATTATTAAAATTATTCAAAAAATTAGAGATAAGGGAAATAGTGTTTTATTGGTTGAACATGATCCTGATCTT
ATTAGAACAGCTGATCATGTCGTTGATATGGGGCCTCTTTCTGGTATCAACGGCGGTGAAATTATTTACCAAGGAACTTT
TGAAGAATTAAAAAATTCATCAGGTTTAACAGGTGCGTTTTTTAGAAGGCCAAATACCTATAAGAAAGAACCACGTATGG
GCAATGAATGGATTTCAATTAAAAATGCTCATTTATTCAATTTAAAAAATATTGATGTCGACATTCCTAAGAACTGTCTA
ACCGTTATTACAGGAGTCGCTGGTTCAGGAAAAAGCACATTAATAAGTAAAGTATTACCACAACAATATCCTGAAACAAA
AGTTGTTGATCAATCTGCAATTACTGCAAGTATTCGCTCAAATTTATTGACCTATCTTGACCTTCTTGATCCGATTCGTC
AGCTATTTGCAAAAACAAATAAAGTAAGTGCCAAGCTCTTTAGTTTTAATAGTGAAGGTGCTTGCCCTCAATGTAAAGGA
TCTGGTATCGAAAGGATTGAACTTGCATTTTTAGATGATGTTGAAATGACATGTGATGTTTGTCATGGTTCTGGATATGC
ACCTGAAGTTTTAAAATATCTTTATAAAGATAAAAATATTGCTGAAATTTTAAAAATGACGGTTGCAGAAGCAAGCAACT
TTTTTGAAGATCAAATTTTACAGCAACAATTTAATTCTTTGATGAGTTTGGGGCTAGACTACATTGCAATCGGCCAACGC
TTAAATACATTTTCGGGTGGTGAGCGTCAAAGGTTAAAACTCACAAAACAAATTAATGAAACAGATAATATTTTTGTATT
GGATGAACCGAGTACAGGTCTGCACCCTTCTGATACTGAAAAACTAATTAGTTTATTAAATAACTTAGTTGAGAAAGGCA
ACACAGTCATTGTGATTGAACATAACTTAGACATCATAAGTCAAGCCGACTGGATTGTTGATATTGGCCTTTTGGCGGGT
GACAAAGGTGGTGAATTGGTATTTTCAGGAACTGTTAGCGGTTTGCTTTCAGCAGAAAAATCTTTAACAGGTTATTATTT
GAAAAAATATTTAGAGCTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(468-671)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

35.173

100

0.364
  uvrA Streptococcus pneumoniae TIGR4

35.173

100

0.364
  uvrA Streptococcus pneumoniae D39

35.173

100

0.364