Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   RDV58_RS00890 Genome accession   NZ_CP133475
Coordinates   174687..175895 (+) Length   402 a.a.
NCBI ID   WP_002262650.1    Uniprot ID   Q8DRQ6
Organism   Streptococcus mutans strain LMG 14558     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 169687..180895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV58_RS00880 (RDV58_00880) - 172997..173659 (-) 663 WP_002262652.1 YoaK family protein -
  RDV58_RS00885 (RDV58_00885) rlmH 174002..174481 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  RDV58_RS00890 (RDV58_00890) htrA 174687..175895 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  RDV58_RS00895 (RDV58_00895) spo0J 176362..177132 (+) 771 WP_002269456.1 ParB/RepB/Spo0J family partition protein Regulator
  RDV58_RS00900 (RDV58_00900) dnaA 177334..178692 (+) 1359 WP_002262648.1 chromosomal replication initiator protein DnaA -
  RDV58_RS00905 (RDV58_00905) dnaN 178848..179984 (+) 1137 WP_002262647.1 DNA polymerase III subunit beta -
  RDV58_RS00910 (RDV58_00910) - 180257..180448 (+) 192 WP_002262646.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 402 a.a.        Molecular weight: 43071.55 Da        Isoelectric Point: 8.8092

>NTDB_id=874560 RDV58_RS00890 WP_002262650.1 174687..175895(+) (htrA) [Streptococcus mutans strain LMG 14558]
MNNTKSHPFLKWFIPFLVIFLTFILGVISTLTFNWITGNKSFSNNGKTTVSNVIYDTKSNTTKAVKNVKNTVVSVINYQK
TDNSYYNYDSGSQEKNKSEDGLGVYGEGSGVIYKKDGDSAYLVTNNHVVKDAEKLEIMMANGKKVVGKLVGSDTYSDLAV
IKISSKYVTTVAEFANSDKIKVGEPAIAIGSPLGSDYANSVTEGIVSSLSRTVTSQNENGETISTNAIQTDAAINPGNSG
GALINIKGQVIGINSSKIASSNNSNSGVAVEGMGFAIPSNDVVSIINQLEENGEVVRPALGISMANLSEASTSGRDTLKI
PSDVTSGIVVLSTQSGMPADGKLKKYDVITEIDGKKVASISDLQSILYKHKKGDKIKLTFYREKDKQTVEIQLTKTSQDL
NH

Nucleotide


Download         Length: 1209 bp        

>NTDB_id=874560 RDV58_RS00890 WP_002262650.1 174687..175895(+) (htrA) [Streptococcus mutans strain LMG 14558]
GTGAATAATACGAAATCTCACCCTTTTTTAAAATGGTTTATACCTTTTTTAGTTATTTTTTTAACTTTTATTTTAGGGGT
CATATCAACACTTACCTTTAATTGGATAACTGGTAACAAATCGTTTTCTAACAATGGAAAAACAACTGTTAGTAATGTCA
TTTATGATACCAAATCTAACACTACCAAGGCTGTTAAAAATGTCAAAAATACAGTTGTATCTGTCATCAATTATCAAAAA
ACAGATAATAGTTATTACAATTATGACAGCGGTTCTCAAGAAAAAAATAAATCAGAGGATGGTCTAGGAGTCTACGGTGA
AGGTTCTGGTGTTATCTATAAAAAAGATGGCGATAGTGCTTATTTAGTTACAAACAATCATGTCGTTAAAGATGCAGAAA
AGTTAGAAATCATGATGGCTAATGGTAAAAAAGTTGTCGGTAAATTAGTAGGTTCTGATACTTATTCTGATCTGGCTGTT
ATTAAAATTTCTTCTAAGTATGTTACGACAGTTGCTGAATTTGCTAATTCGGATAAAATAAAAGTTGGAGAACCAGCAAT
CGCTATTGGTAGCCCTTTAGGCAGTGATTATGCTAATTCTGTAACAGAAGGAATTGTTTCAAGTCTCAGTCGTACAGTAA
CTTCACAAAATGAAAATGGCGAAACAATTTCAACTAATGCTATTCAAACAGACGCAGCTATTAACCCTGGTAATTCTGGT
GGCGCTTTAATTAATATCAAAGGACAAGTTATTGGTATCAATTCAAGTAAAATTGCATCAAGTAATAACTCAAATAGTGG
CGTTGCTGTTGAAGGAATGGGCTTTGCAATTCCTTCAAACGATGTTGTCTCTATTATTAATCAATTAGAAGAAAATGGTG
AAGTTGTTAGACCCGCTCTTGGTATTTCAATGGCTAATCTTAGTGAAGCTTCAACAAGTGGAAGAGATACTTTAAAAATA
CCAAGTGATGTCACAAGCGGTATTGTTGTTCTTTCAACACAAAGTGGTATGCCAGCAGATGGGAAGCTGAAGAAATATGA
TGTCATTACAGAAATTGATGGGAAGAAGGTAGCGTCTATCAGCGATCTTCAAAGTATTCTTTACAAACACAAAAAGGGAG
ATAAAATTAAACTCACTTTCTATCGCGAAAAAGATAAACAAACAGTTGAGATCCAATTAACTAAAACAAGTCAAGATTTG
AATCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DRQ6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

100

100

1

  htrA Streptococcus gordonii str. Challis substr. CH1

56.14

99.254

0.557

  htrA Streptococcus mitis NCTC 12261

54.684

98.259

0.537

  htrA Streptococcus pneumoniae Rx1

54.315

98.01

0.532

  htrA Streptococcus pneumoniae D39

54.315

98.01

0.532

  htrA Streptococcus pneumoniae R6

54.315

98.01

0.532

  htrA Streptococcus pneumoniae TIGR4

54.315

98.01

0.532