Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   RDV58_RS00895 Genome accession   NZ_CP133475
Coordinates   176362..177132 (+) Length   256 a.a.
NCBI ID   WP_002269456.1    Uniprot ID   -
Organism   Streptococcus mutans strain LMG 14558     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 171362..182132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV58_RS00880 (RDV58_00880) - 172997..173659 (-) 663 WP_002262652.1 YoaK family protein -
  RDV58_RS00885 (RDV58_00885) rlmH 174002..174481 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  RDV58_RS00890 (RDV58_00890) htrA 174687..175895 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  RDV58_RS00895 (RDV58_00895) spo0J 176362..177132 (+) 771 WP_002269456.1 ParB/RepB/Spo0J family partition protein Regulator
  RDV58_RS00900 (RDV58_00900) dnaA 177334..178692 (+) 1359 WP_002262648.1 chromosomal replication initiator protein DnaA -
  RDV58_RS00905 (RDV58_00905) dnaN 178848..179984 (+) 1137 WP_002262647.1 DNA polymerase III subunit beta -
  RDV58_RS00910 (RDV58_00910) - 180257..180448 (+) 192 WP_002262646.1 DUF951 domain-containing protein -
  RDV58_RS00915 (RDV58_00915) ychF 180612..181727 (+) 1116 WP_002264633.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 29492.16 Da        Isoelectric Point: 10.1578

>NTDB_id=874561 RDV58_RS00895 WP_002269456.1 176362..177132(+) (spo0J) [Streptococcus mutans strain LMG 14558]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSVEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=874561 RDV58_RS00895 WP_002269456.1 176362..177132(+) (spo0J) [Streptococcus mutans strain LMG 14558]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTGTAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-196)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.219

100

0.992