Detailed information NTG0871458

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: RBI10_RS13510
• Genome accession: NZ_CP133047
• Coordinates: 2843221..2844339 (+)
• Length: 372 a.a.
• NCBI ID: WP_032063405.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain A1269
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2838221..2849339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBI10_RS13500 (RBI10_13540)	yggS	2841345..2842037 (-)	693	WP_069119664.1	YggS family pyridoxal phosphate-dependent enzyme	-
RBI10_RS13505 (RBI10_13545)	pilT	2842164..2843201 (+)	1038	WP_002121749.1	type IV pilus twitching motility protein PilT	Machinery gene
RBI10_RS13510 (RBI10_13550)	pilU	2843221..2844339 (+)	1119	WP_032063405.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
RBI10_RS13515 (RBI10_13555)	fur	2844409..2844846 (-)	438	WP_002121758.1	ferric iron uptake transcriptional regulator	-
RBI10_RS13520 (RBI10_13560)	omlA	2844958..2845356 (+)	399	WP_002121740.1	outer membrane protein assembly factor BamE	-
RBI10_RS13525 (RBI10_13565)	-	2845421..2845735 (-)	315	WP_002121714.1	RnfH family protein	-
RBI10_RS13530 (RBI10_13570)	-	2845735..2846802 (-)	1068	WP_005075306.1	hypothetical protein	-
RBI10_RS13535 (RBI10_13575)	-	2846956..2847411 (-)	456	WP_002121698.1	bacteriohemerythrin	-
RBI10_RS13540 (RBI10_13580)	-	2847663..2848511 (-)	849	WP_014205980.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41965.17 Da
• Isoelectric Point: 6.6404

>NTDB_id=871458 RBI10_RS13510 WP_032063405.1 2843221..2844339(+) (pilU) [Acinetobacter pittii strain A1269]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEIIGQLLHSIMSEKQRKEFAETRECNFAIMNRDKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDFSMTKRGIIIFVGATGTGKSTSLASMISYRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKSGQITYKDALKHADSPNDLRLTIKLAEEGPEQIAGTNQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=871458 RBI10_RS13510 WP_032063405.1 2843221..2844339(+) (pilU) [Acinetobacter pittii strain A1269]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAAAAATCATCCGACCTCTTTATTACAGATGGCGTTGCACCATC
GATGAAGATTAACGGGCAAATTGTTCCCATTTCAAAAAATAGTCTTTCAGGCGAAATTATTGGGCAACTCTTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCTGAGACTCGTGAATGTAACTTTGCCATTATGAACCGTGATAAAACTGCC
CGCTTTCGTGTGAGTGCTTTTCAGCAACGCGACATGCCAGGCATGGTATTAAGGCGAATTGAAACTAAAATTCCTTCAAT
TGATGACTTGCAATTACCGCCTGTGCTTAAAGATTTCTCAATGACCAAACGCGGTATCATTATTTTTGTAGGTGCAACAG
GTACAGGTAAATCGACATCATTGGCTTCAATGATTAGCTATCGTAACCATAACTCTAAAGGTCATATCATTACCATTGAA
GACCCTATCGAGTTTATTCATGAACACGCTGGCTGCATCATTACCCAACGTGAAGTTGGGATCGATACAGACTCATTTGA
AATTGCTTTAAAGAATACGTTGCGACAAGCACCCGATGTAATCTTGATTGGTGAGATTCGCTCTCGTGAAGTTATGGACT
ACGCGATTGGCTTCGCCGAAACAGGTCACCTTGTATTAGCCACAATGCATGCGAACAATGCCAACCAAGCACTTGACCGT
ATTATTCACTTCTTTGAAAGTGACCGCCACAGTCAGCTCTACATGGACTTATCTCTTAACTTAAAGGCCATGATTGCACA
GCAACTTATTCCGACTCCAGATGGTAATTCGCGCCGTGCCGCAATCGAGATTCTCATTAACTCACCATTAATTTCAGACT
ATATTCGTAAAGGCGAAATTCATGAAATTAAAGATTTAATGAAACGCTCACGTGAACTCGGTATGCAAACTTTTGACCAA
GCACTGTTTGATCTTTATAAGTCGGGCCAAATTACCTACAAAGATGCATTAAAACATGCCGACTCACCAAACGATTTGCG
TTTAACAATTAAGCTTGCCGAAGAAGGTCCTGAGCAAATTGCAGGCACAAATCAGCATTTAACCTTCGACAGACAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (32-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.397	100	0.766
pilU	Pseudomonas stutzeri DSM 10701	68.464	99.731	0.683
pilU	Vibrio cholerae strain A1552	53.514	99.462	0.532
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	40.934	97.849	0.401
pilT	Legionella pneumophila strain Lp02	39.941	90.86	0.363
pilT	Legionella pneumophila strain ERS1305867	39.941	90.86	0.363