Detailed information NTG0871431

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: RBI10_RS01505
• Genome accession: NZ_CP133047
• Coordinates: 322892..323950 (+)
• Length: 352 a.a.
• NCBI ID: WP_069120207.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain A1269
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 317892..328950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBI10_RS01490 (RBI10_01495)	-	318918..319250 (+)	333	WP_002116981.1	hypothetical protein	-
RBI10_RS01495 (RBI10_01500)	rrmA	319253..320077 (+)	825	WP_081318661.1	putative RNA methyltransferase	-
RBI10_RS01500 (RBI10_01505)	ponA	320169..322730 (-)	2562	WP_069120210.1	penicillin-binding protein PBP1a	-
RBI10_RS01505 (RBI10_01510)	comM	322892..323950 (+)	1059	WP_069120207.1	pilus assembly protein PilM	Machinery gene
RBI10_RS01510 (RBI10_01515)	pilN	323950..324591 (+)	642	WP_069120205.1	PilN domain-containing protein	Machinery gene
RBI10_RS01515 (RBI10_01520)	pilO	324588..325340 (+)	753	WP_069120201.1	type 4a pilus biogenesis protein PilO	Machinery gene
RBI10_RS01520 (RBI10_01525)	pilP	325351..325878 (+)	528	WP_069120199.1	pilus assembly protein PilP	Machinery gene
RBI10_RS01525 (RBI10_01530)	pilQ	325941..328067 (+)	2127	WP_069120196.1	type IV pilus secretin PilQ	Machinery gene
RBI10_RS01530 (RBI10_01535)	aroK	328079..328648 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39010.61 Da
• Isoelectric Point: 4.5028

>NTDB_id=871431 RBI10_RS01505 WP_069120207.1 322892..323950(+) (comM) [Acinetobacter pittii strain A1269]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFG

Nucleotide

• Length: 1059 bp

>NTDB_id=871431 RBI10_RS01505 WP_069120207.1 322892..323950(+) (comM) [Acinetobacter pittii strain A1269]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TTTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGTGTAGAAGTATTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACTATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GTAATGCCAACATTCCAGGGCTTGCTAAATTGTTGCAGCAAAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGGTTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	96.296	99.716	0.96
pilM	Acinetobacter baumannii D1279779	96.296	99.716	0.96
comM	Acinetobacter baylyi ADP1	81.197	99.716	0.81
pilM	Legionella pneumophila strain ERS1305867	42.165	99.716	0.42