Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   Q9G86_RS15935 Genome accession   NZ_CP132200
Coordinates   3131298..3131573 (-) Length   91 a.a.
NCBI ID   WP_255259069.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain L1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 3126298..3136573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9G86_RS15920 (Q9G86_15920) - 3126556..3127893 (+) 1338 WP_016512591.1 erythromycin esterase family protein -
  Q9G86_RS15925 (Q9G86_15925) - 3128097..3128675 (+) 579 WP_097914605.1 sensor domain-containing protein -
  Q9G86_RS15930 (Q9G86_15930) - 3128790..3130577 (+) 1788 WP_305925776.1 hybrid sensor histidine kinase/response regulator transcription factor -
  Q9G86_RS28925 - 3130807..3130987 (-) 181 Protein_3078 hypothetical protein -
  Q9G86_RS15935 (Q9G86_15935) rcrQ 3131298..3131573 (-) 276 WP_255259069.1 hypothetical protein Regulator
  Q9G86_RS28930 - 3131589..3131705 (-) 117 Protein_3080 hypothetical protein -
  Q9G86_RS15940 (Q9G86_15940) rcrQ 3131719..3132012 (-) 294 WP_157812362.1 ATP-binding cassette domain-containing protein Regulator
  Q9G86_RS15945 (Q9G86_15945) - 3132109..3132771 (-) 663 WP_276565377.1 ABC transporter ATP-binding protein -
  Q9G86_RS15950 (Q9G86_15950) - 3133138..3135699 (-) 2562 WP_305925777.1 PBP1A family penicillin-binding protein -
  Q9G86_RS15955 (Q9G86_15955) - 3136041..3136289 (+) 249 Protein_3084 IS4 family transposase -
  Q9G86_RS15960 (Q9G86_15960) - 3136265..3136509 (-) 245 Protein_3085 IS4 family transposase -

Sequence


Protein


Download         Length: 91 a.a.        Molecular weight: 10143.58 Da        Isoelectric Point: 4.2397

>NTDB_id=867602 Q9G86_RS15935 WP_255259069.1 3131298..3131573(-) (rcrQ) [Bacillus thuringiensis strain L1]
MLVDPPMLILDEATSSIDTLTEIRIQAAFLKMMEGRTSFVIAHRLSTIREADMILYMKDGDVVESGSHEQLLEQGGYYAN
LYNSQFAAVNG

Nucleotide


Download         Length: 276 bp        

>NTDB_id=867602 Q9G86_RS15935 WP_255259069.1 3131298..3131573(-) (rcrQ) [Bacillus thuringiensis strain L1]
ATGCTGGTTGATCCGCCTATGCTAATTCTCGACGAAGCGACGAGCAGCATTGATACGCTGACGGAGATTCGTATCCAGGC
GGCGTTCCTGAAGATGATGGAAGGCAGAACGAGTTTCGTTATCGCTCACCGTTTGTCGACGATCCGTGAGGCAGATATGA
TCCTCTACATGAAGGACGGGGATGTCGTCGAAAGCGGGAGTCATGAGCAGCTGCTGGAGCAGGGTGGGTACTACGCCAAT
CTGTATAACAGCCAATTCGCGGCTGTGAATGGTTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

67.442

94.505

0.637

  comA Streptococcus mitis SK321

46.429

92.308

0.429

  comA Streptococcus mitis NCTC 12261

46.429

92.308

0.429

  comA Streptococcus pneumoniae TIGR4

46.429

92.308

0.429

  comA Streptococcus pneumoniae Rx1

46.429

92.308

0.429

  comA Streptococcus pneumoniae D39

46.429

92.308

0.429

  comA Streptococcus pneumoniae R6

46.429

92.308

0.429

  comA Streptococcus gordonii str. Challis substr. CH1

46.429

92.308

0.429

  comA/nlmT Streptococcus mutans UA159

46.988

91.209

0.429