Detailed information NTG0853571

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QYL89_RS06060
• Genome accession: NZ_CP129462
• Coordinates: 1279528..1280502 (+)
• Length: 324 a.a.
• NCBI ID: WP_014613820.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain R41-1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1274528..1285502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYL89_RS06025	rpmG	1274912..1275076 (+)	165	WP_256726578.1	50S ribosomal protein L33	-
QYL89_RS06030	-	1275228..1275767 (+)	540	WP_014613814.1	5-formyltetrahydrofolate cyclo-ligase	-
QYL89_RS06035	-	1275786..1277225 (+)	1440	WP_301409399.1	rhomboid family intramembrane serine protease	-
QYL89_RS06040	-	1277227..1277430 (+)	204	WP_014613816.1	YqgQ family protein	-
QYL89_RS06045	-	1277427..1278413 (+)	987	WP_014613817.1	ROK family glucokinase	-
QYL89_RS06050	-	1278414..1278725 (+)	312	WP_014613818.1	MTH1187 family thiamine-binding protein	-
QYL89_RS06055	-	1278738..1279367 (+)	630	WP_037542865.1	MBL fold metallo-hydrolase	-
QYL89_RS06060	comGA	1279528..1280502 (+)	975	WP_014613820.1	competence type IV pilus ATPase ComGA	Machinery gene
QYL89_RS06065	comGB	1280471..1281538 (+)	1068	WP_063284398.1	competence type IV pilus assembly protein ComGB	-
QYL89_RS06070	comGC	1281551..1281874 (+)	324	WP_015729165.1	competence type IV pilus major pilin ComGC	Machinery gene
QYL89_RS06075	comGD	1281852..1282292 (+)	441	WP_063284397.1	competence type IV pilus minor pilin ComGD	-
QYL89_RS06080	-	1282397..1282597 (+)	201	WP_020219623.1	hypothetical protein	-
QYL89_RS06085	-	1282503..1282988 (+)	486	WP_080552896.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
QYL89_RS06090	-	1283152..1283679 (+)	528	WP_014613826.1	shikimate kinase	-
QYL89_RS06095	gcvT	1283837..1284928 (+)	1092	WP_063284396.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36846.58 Da
• Isoelectric Point: 7.5584

>NTDB_id=853571 QYL89_RS06060 WP_014613820.1 1279528..1280502(+) (comGA) [Staphylococcus pseudintermedius strain R41-1]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI

Nucleotide

• Length: 975 bp

>NTDB_id=853571 QYL89_RS06060 WP_014613820.1 1279528..1280502(+) (comGA) [Staphylococcus pseudintermedius strain R41-1]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCATCAGACATTCATTTTATCCCATCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGCGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAACGGCATTACGCAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGATCGTCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGTGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (9-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.514	99.691	0.583
comGA	Staphylococcus aureus N315	58.514	99.691	0.583