Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QVG61_RS01505 Genome accession   NZ_CP128988
Coordinates   306676..307035 (+) Length   119 a.a.
NCBI ID   WP_289931550.1    Uniprot ID   -
Organism   Thiohalobacter sp. IOR34     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 301676..312035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QVG61_RS01485 (QVG61_01485) - 302611..302961 (-) 351 WP_289931546.1 AF1514 family protein -
  QVG61_RS01490 (QVG61_01490) - 302958..304016 (-) 1059 WP_289931547.1 FAD:protein FMN transferase -
  QVG61_RS01495 (QVG61_01495) gshB 304013..304981 (-) 969 WP_289931548.1 glutathione synthase -
  QVG61_RS01500 (QVG61_01500) gshA 305084..306385 (-) 1302 WP_289931549.1 glutamate--cysteine ligase -
  QVG61_RS01505 (QVG61_01505) pilG 306676..307035 (+) 360 WP_289931550.1 response regulator Regulator
  QVG61_RS01510 (QVG61_01510) pilH 307147..307512 (+) 366 WP_289931551.1 twitching motility response regulator PilH -
  QVG61_RS01515 (QVG61_01515) - 307542..308084 (+) 543 WP_289931552.1 chemotaxis protein CheW -
  QVG61_RS01520 (QVG61_01520) - 308163..310205 (+) 2043 WP_289931553.1 methyl-accepting chemotaxis protein -
  QVG61_RS01525 (QVG61_01525) - 310228..311118 (+) 891 WP_289931554.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 119 a.a.        Molecular weight: 13247.42 Da        Isoelectric Point: 9.1320

>NTDB_id=850216 QVG61_RS01505 WP_289931550.1 306676..307035(+) (pilG) [Thiohalobacter sp. IOR34]
MVIDDSKTIRRTAETLLKKAGCEVVTATDGFEALAKIADQRPDIIFVDIMMPRLDGYQTCALIKHNQVFKHTPVIMLSSK
DGLFDRARGRIVGSDQYLTKPFSKDELLGAIKAHVRPST

Nucleotide


Download         Length: 360 bp        

>NTDB_id=850216 QVG61_RS01505 WP_289931550.1 306676..307035(+) (pilG) [Thiohalobacter sp. IOR34]
ATGGTGATCGACGACAGCAAGACTATCCGGCGGACCGCCGAGACCTTGCTGAAGAAGGCTGGCTGTGAGGTGGTGACCGC
CACCGATGGTTTCGAGGCTCTGGCCAAGATCGCCGATCAGCGACCGGACATCATCTTCGTCGACATCATGATGCCGCGCC
TGGACGGTTACCAGACCTGCGCCCTGATCAAGCACAACCAGGTCTTCAAGCACACGCCGGTCATCATGCTGTCGTCCAAG
GACGGCCTGTTCGACCGGGCGCGTGGCCGCATCGTCGGTTCCGACCAATATCTGACCAAACCCTTTTCCAAGGACGAGCT
GCTCGGTGCCATCAAGGCGCACGTGCGGCCATCGACCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

79.13

96.639

0.765
  vicR Streptococcus mutans UA159

43.966

97.479

0.429
  pilH Synechocystis sp. PCC 6803

43.103

97.479

0.42
  micA Streptococcus pneumoniae Cp1015

40.678

99.16

0.403
  chpA Acinetobacter baumannii strain A118

39.823

94.958

0.378
  chiS Vibrio cholerae strain A1552

37.288

99.16

0.37