Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | QU662_RS03655 | Genome accession | NZ_CP128651 |
| Coordinates | 743048..743914 (+) | Length | 288 a.a. |
| NCBI ID | WP_011275951.1 | Uniprot ID | - |
| Organism | Staphylococcus haemolyticus strain F0718 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 709155..756764 | 743048..743914 | within | 0 |
Gene organization within MGE regions
Location: 709155..756764
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QU662_RS03510 (QU662_03510) | rsgA | 710494..711369 (+) | 876 | WP_011275979.1 | ribosome small subunit-dependent GTPase A | - |
| QU662_RS03515 (QU662_03515) | rpe | 711369..712013 (+) | 645 | WP_011275978.1 | ribulose-phosphate 3-epimerase | - |
| QU662_RS03520 (QU662_03520) | - | 712021..712662 (+) | 642 | WP_011275977.1 | thiamine diphosphokinase | - |
| QU662_RS03525 (QU662_03525) | rpmB | 712723..712911 (-) | 189 | WP_011275976.1 | 50S ribosomal protein L28 | - |
| QU662_RS03530 (QU662_03530) | - | 713194..713562 (+) | 369 | WP_011275975.1 | Asp23/Gls24 family envelope stress response protein | - |
| QU662_RS03535 (QU662_03535) | fakA | 713583..715241 (+) | 1659 | WP_011275974.1 | fatty acid kinase catalytic subunit FakA | - |
| QU662_RS03540 (QU662_03540) | - | 715427..716227 (+) | 801 | WP_011275973.1 | thermonuclease family protein | - |
| QU662_RS03545 (QU662_03545) | recG | 716382..718433 (+) | 2052 | WP_016930693.1 | ATP-dependent DNA helicase RecG | - |
| QU662_RS03550 (QU662_03550) | fapR | 718569..719129 (+) | 561 | WP_011275971.1 | transcription factor FapR | - |
| QU662_RS03555 (QU662_03555) | plsX | 719131..720117 (+) | 987 | WP_011275970.1 | phosphate acyltransferase PlsX | - |
| QU662_RS03560 (QU662_03560) | fabD | 720110..721039 (+) | 930 | WP_011275969.1 | ACP S-malonyltransferase | - |
| QU662_RS03565 (QU662_03565) | fabG | 721029..721766 (+) | 738 | WP_011275968.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| QU662_RS03570 (QU662_03570) | - | 721879..722112 (+) | 234 | WP_001830184.1 | acyl carrier protein | - |
| QU662_RS03575 (QU662_03575) | rnc | 722198..722935 (+) | 738 | WP_011275967.1 | ribonuclease III | - |
| QU662_RS03580 (QU662_03580) | smc | 723020..726589 (+) | 3570 | WP_016930692.1 | chromosome segregation protein SMC | - |
| QU662_RS03585 (QU662_03585) | ftsY | 726586..727809 (+) | 1224 | WP_011275965.1 | signal recognition particle-docking protein FtsY | - |
| QU662_RS03590 (QU662_03590) | - | 727796..728128 (+) | 333 | WP_011275964.1 | putative DNA-binding protein | - |
| QU662_RS03595 (QU662_03595) | ffh | 728154..729524 (+) | 1371 | WP_011275963.1 | signal recognition particle protein | - |
| QU662_RS03600 (QU662_03600) | rpsP | 729771..730046 (+) | 276 | WP_011275962.1 | 30S ribosomal protein S16 | - |
| QU662_RS03605 (QU662_03605) | rimM | 730165..730668 (+) | 504 | WP_011275961.1 | ribosome maturation factor RimM | - |
| QU662_RS03610 (QU662_03610) | trmD | 730668..731405 (+) | 738 | WP_011275960.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| QU662_RS03615 (QU662_03615) | rplS | 731510..731860 (+) | 351 | WP_011275959.1 | 50S ribosomal protein L19 | - |
| QU662_RS03620 (QU662_03620) | - | 732017..734626 (-) | 2610 | WP_011275958.1 | YfhO family protein | - |
| QU662_RS03625 (QU662_03625) | - | 734628..737222 (-) | 2595 | WP_304984759.1 | YfhO family protein | - |
| QU662_RS03630 (QU662_03630) | ylqF | 737460..738344 (+) | 885 | WP_011275956.1 | ribosome biogenesis GTPase YlqF | - |
| QU662_RS03635 (QU662_03635) | - | 738328..739095 (+) | 768 | WP_011275955.1 | ribonuclease HII | - |
| QU662_RS03640 (QU662_03640) | sucC | 739207..740373 (+) | 1167 | WP_011275954.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| QU662_RS03645 (QU662_03645) | sucD | 740395..741300 (+) | 906 | WP_011275953.1 | succinate--CoA ligase subunit alpha | - |
| QU662_RS03650 (QU662_03650) | - | 741600..742829 (+) | 1230 | WP_011275952.1 | aminoacyltransferase | - |
| QU662_RS03655 (QU662_03655) | dprA | 743048..743914 (+) | 867 | WP_011275951.1 | DNA-processing protein DprA | Machinery gene |
| QU662_RS03660 (QU662_03660) | topA | 744093..746162 (+) | 2070 | WP_011275950.1 | type I DNA topoisomerase | - |
| QU662_RS03665 (QU662_03665) | trmFO | 746186..747493 (+) | 1308 | WP_011275949.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| QU662_RS03670 (QU662_03670) | xerC | 747638..748531 (+) | 894 | WP_016930690.1 | tyrosine recombinase XerC | - |
| QU662_RS03675 (QU662_03675) | hslV | 748532..749077 (+) | 546 | WP_011275947.1 | ATP-dependent protease subunit HslV | - |
| QU662_RS03680 (QU662_03680) | hslU | 749136..750539 (+) | 1404 | WP_011275946.1 | ATP-dependent protease ATPase subunit HslU | - |
| QU662_RS03685 (QU662_03685) | codY | 750561..751334 (+) | 774 | WP_011275945.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| QU662_RS03690 (QU662_03690) | rpsB | 751601..752389 (+) | 789 | WP_011275944.1 | 30S ribosomal protein S2 | - |
| QU662_RS03695 (QU662_03695) | tsf | 752547..753425 (+) | 879 | WP_011275943.1 | translation elongation factor Ts | - |
| QU662_RS03700 (QU662_03700) | pyrH | 753562..754284 (+) | 723 | WP_011275942.1 | UMP kinase | - |
| QU662_RS03705 (QU662_03705) | frr | 754302..754856 (+) | 555 | WP_011275941.1 | ribosome recycling factor | - |
| QU662_RS03710 (QU662_03710) | - | 755082..755852 (+) | 771 | WP_011275940.1 | isoprenyl transferase | - |
| QU662_RS03715 (QU662_03715) | - | 755856..756638 (+) | 783 | WP_016930688.1 | phosphatidate cytidylyltransferase | - |
Sequence
Protein
Download Length: 288 a.a. Molecular weight: 33058.12 Da Isoelectric Point: 9.4081
>NTDB_id=849491 QU662_RS03655 WP_011275951.1 743048..743914(+) (dprA) [Staphylococcus haemolyticus strain F0718]
MTNNNILLLKLIWLGYTTQHIHHLLKLNPEFFKFSYTDQIDSIKNWDKLFHKGDFIDRYNHLNDKEILSFLNQHKISFVT
PFNANYPRLLKEIYDYPFVLFYQGDPQLLTSPNTLGVVGSRNATEYSAKAMQYLFPKFKQIPLTIISGLAKGADSIAHHF
AIEYQLPTIAVLGFGHMMHYPRETQKLRNIIEVKGLVISEYPPFTSVRRYHFPQRNRLISGLSQGVLITEASVRSGSQIT
IDCALDQNRNIYVLPGSIFNPLTKGNLKRAQEGAMIVTSADDILCDYK
MTNNNILLLKLIWLGYTTQHIHHLLKLNPEFFKFSYTDQIDSIKNWDKLFHKGDFIDRYNHLNDKEILSFLNQHKISFVT
PFNANYPRLLKEIYDYPFVLFYQGDPQLLTSPNTLGVVGSRNATEYSAKAMQYLFPKFKQIPLTIISGLAKGADSIAHHF
AIEYQLPTIAVLGFGHMMHYPRETQKLRNIIEVKGLVISEYPPFTSVRRYHFPQRNRLISGLSQGVLITEASVRSGSQIT
IDCALDQNRNIYVLPGSIFNPLTKGNLKRAQEGAMIVTSADDILCDYK
Nucleotide
Download Length: 867 bp
>NTDB_id=849491 QU662_RS03655 WP_011275951.1 743048..743914(+) (dprA) [Staphylococcus haemolyticus strain F0718]
ATGACTAACAACAACATATTACTTTTGAAATTAATTTGGTTAGGTTATACGACCCAACATATTCATCATTTATTAAAATT
AAATCCTGAATTTTTTAAATTCTCTTATACTGATCAAATAGATTCAATAAAAAATTGGGACAAGTTATTTCATAAAGGTG
ATTTTATTGATAGATATAATCATTTAAATGATAAAGAAATTTTGTCATTTTTGAATCAACACAAGATAAGTTTTGTAACA
CCGTTTAACGCTAATTATCCTCGACTATTAAAAGAAATTTATGATTATCCGTTTGTCCTATTTTACCAAGGTGACCCCCA
ATTATTAACATCCCCCAATACATTAGGTGTGGTGGGCTCAAGAAATGCAACAGAGTACTCAGCTAAAGCCATGCAATACT
TATTTCCTAAATTTAAACAAATTCCACTAACCATTATTTCCGGTTTGGCAAAAGGTGCTGATAGCATTGCACATCATTTT
GCTATAGAGTATCAATTACCTACTATAGCTGTTTTAGGTTTTGGTCATATGATGCATTACCCTAGAGAAACGCAAAAATT
ACGCAACATAATTGAAGTAAAAGGTTTAGTTATTAGTGAATATCCGCCATTCACTAGTGTTAGGCGATATCACTTTCCGC
AACGCAATCGTTTGATAAGCGGTCTTTCACAAGGGGTTTTAATAACTGAAGCAAGTGTTAGAAGCGGTAGTCAAATTACA
ATTGATTGCGCATTAGACCAAAATAGAAATATATATGTATTACCAGGTTCAATATTTAATCCACTAACTAAAGGTAATTT
GAAACGAGCTCAAGAAGGTGCGATGATTGTAACCTCAGCTGATGATATTCTATGTGATTATAAATAG
ATGACTAACAACAACATATTACTTTTGAAATTAATTTGGTTAGGTTATACGACCCAACATATTCATCATTTATTAAAATT
AAATCCTGAATTTTTTAAATTCTCTTATACTGATCAAATAGATTCAATAAAAAATTGGGACAAGTTATTTCATAAAGGTG
ATTTTATTGATAGATATAATCATTTAAATGATAAAGAAATTTTGTCATTTTTGAATCAACACAAGATAAGTTTTGTAACA
CCGTTTAACGCTAATTATCCTCGACTATTAAAAGAAATTTATGATTATCCGTTTGTCCTATTTTACCAAGGTGACCCCCA
ATTATTAACATCCCCCAATACATTAGGTGTGGTGGGCTCAAGAAATGCAACAGAGTACTCAGCTAAAGCCATGCAATACT
TATTTCCTAAATTTAAACAAATTCCACTAACCATTATTTCCGGTTTGGCAAAAGGTGCTGATAGCATTGCACATCATTTT
GCTATAGAGTATCAATTACCTACTATAGCTGTTTTAGGTTTTGGTCATATGATGCATTACCCTAGAGAAACGCAAAAATT
ACGCAACATAATTGAAGTAAAAGGTTTAGTTATTAGTGAATATCCGCCATTCACTAGTGTTAGGCGATATCACTTTCCGC
AACGCAATCGTTTGATAAGCGGTCTTTCACAAGGGGTTTTAATAACTGAAGCAAGTGTTAGAAGCGGTAGTCAAATTACA
ATTGATTGCGCATTAGACCAAAATAGAAATATATATGTATTACCAGGTTCAATATTTAATCCACTAACTAAAGGTAATTT
GAAACGAGCTCAAGAAGGTGCGATGATTGTAACCTCAGCTGATGATATTCTATGTGATTATAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Staphylococcus aureus MW2 |
49.825 |
98.958 |
0.493 |
| dprA | Staphylococcus aureus N315 |
49.825 |
98.958 |
0.493 |
| dprA/cilB/dalA | Streptococcus pneumoniae Rx1 |
36.395 |
100 |
0.372 |
| dprA/cilB/dalA | Streptococcus pneumoniae D39 |
36.395 |
100 |
0.372 |
| dprA/cilB/dalA | Streptococcus pneumoniae R6 |
36.395 |
100 |
0.372 |
| dprA/cilB/dalA | Streptococcus pneumoniae TIGR4 |
36.395 |
100 |
0.372 |
| dprA | Streptococcus mutans UA159 |
37.544 |
98.958 |
0.372 |
| dprA/cilB/dalA | Streptococcus mitis SK321 |
35.374 |
100 |
0.361 |
| dprA | Legionella pneumophila strain ERS1305867 |
42.105 |
85.764 |
0.361 |