Detailed information NTG0847315

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: QSV38_RS05680
• Genome accession: NZ_CP128410
• Coordinates: 1095018..1095920 (-)
• Length: 300 a.a.
• NCBI ID: WP_277837249.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain 7500
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1090018..1100920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSV38_RS05670 (QSV38_05670)	-	1091885..1093405 (-)	1521	WP_274504433.1	quinol oxidase	-
QSV38_RS05675 (QSV38_05675)	-	1093589..1094809 (-)	1221	WP_289646191.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
QSV38_RS05680 (QSV38_05680)	comR	1095018..1095920 (-)	903	WP_277837249.1	transcriptional regulator	Regulator
QSV38_RS05685 (QSV38_05685)	-	1096076..1096690 (-)	615	WP_289646193.1	HAD-IA family hydrolase	-
QSV38_RS05690 (QSV38_05690)	-	1096692..1097438 (-)	747	WP_289646194.1	GNAT family N-acetyltransferase	-
QSV38_RS05695 (QSV38_05695)	ruvB	1097438..1098436 (-)	999	WP_289646195.1	Holliday junction branch migration DNA helicase RuvB	-
QSV38_RS05700 (QSV38_05700)	-	1098563..1099222 (+)	660	WP_239604822.1	amino acid ABC transporter permease	-
QSV38_RS05705 (QSV38_05705)	-	1099203..1099880 (+)	678	WP_289646196.1	amino acid ABC transporter permease	-
QSV38_RS05710 (QSV38_05710)	-	1099885..1100631 (+)	747	WP_289646197.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 300 a.a.
• Molecular weight: 35893.83 Da
• Isoelectric Point: 4.6406

>NTDB_id=847315 QSV38_RS05680 WP_277837249.1 1095018..1095920(-) (comR) [Streptococcus parasuis strain 7500]
MNDKEFGQRVRYLREKLAITREEFCEDELELSVRQLSRIEAGQCKPTFSKIGFIASRLNMGLYELMPDYVQLPERYSRLK
YEVLRTPTYGDQFLVEQRDQMLTIIYDEYYDELPEEEKIAIDAFQSTIDVFETRSNQFGKEILDDYFEQVHRKEKYSIND
LLIIRLYLEHIRNRDTDATIYHYFSSLVTHLPNQQEVMDSKELFILRDVILISIGILGDREDYEKIPSLFDALDKIMVLT
QDFQKKPILNLLKWKYELHVNKNRDAAQSYFEEATLFAKLIGNDYLVHKIKEDWEEDSRL

Nucleotide

• Length: 903 bp

>NTDB_id=847315 QSV38_RS05680 WP_277837249.1 1095018..1095920(-) (comR) [Streptococcus parasuis strain 7500]
GTGAACGATAAGGAATTTGGGCAACGTGTGAGATATTTACGGGAGAAATTAGCAATTACGCGTGAAGAATTCTGTGAAGA
TGAACTAGAATTATCTGTTCGTCAATTGAGTCGTATAGAAGCGGGACAATGCAAACCAACTTTTTCAAAGATAGGTTTTA
TAGCAAGCAGGTTGAATATGGGTTTATATGAGCTTATGCCGGATTATGTCCAACTTCCGGAACGCTATTCGCGTCTAAAA
TATGAGGTATTACGAACTCCTACCTATGGAGACCAATTTTTGGTAGAACAACGCGATCAAATGTTGACAATCATTTATGA
TGAATATTACGATGAGCTTCCAGAAGAAGAAAAAATAGCTATTGATGCTTTTCAGTCGACAATTGATGTATTTGAAACAC
GGTCTAATCAATTTGGCAAAGAGATTTTGGACGATTATTTTGAACAAGTTCATCGTAAAGAAAAATATTCGATAAATGAC
TTGTTAATCATTCGACTATACCTTGAGCATATTAGAAATAGGGACACTGACGCAACAATCTATCACTATTTTTCCTCACT
TGTTACCCATCTGCCTAATCAACAGGAGGTAATGGATTCAAAAGAGTTATTTATTCTAAGGGATGTTATATTAATCTCAA
TAGGGATTTTAGGGGATCGAGAAGACTATGAGAAAATCCCGTCTCTTTTTGATGCTTTAGATAAAATAATGGTTTTAACT
CAAGATTTTCAAAAGAAACCTATTTTAAACTTATTGAAGTGGAAATACGAGCTCCACGTTAATAAGAACCGAGATGCCGC
ACAGAGTTACTTTGAAGAAGCTACCCTTTTTGCGAAGCTAATTGGAAATGATTATCTAGTTCACAAAATTAAAGAAGACT
GGGAAGAGGATTCACGGCTTTAG

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (73-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus suis 05ZYH33	62.207	99.667	0.62
comR	Streptococcus suis P1/7	62.207	99.667	0.62
comR	Streptococcus suis D9	56.811	100	0.57
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	41.869	96.333	0.403
comR	Streptococcus mutans UA159	40.134	99.667	0.4
comR	Streptococcus pyogenes MGAS8232	39.13	99.667	0.39
comR	Streptococcus pyogenes MGAS315	36.213	100	0.363