Detailed information NTG0084479

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: L6410_RS05955
• Genome accession: NZ_AP024276
• Coordinates: 1181919..1184072 (+)
• Length: 717 a.a.
• NCBI ID: WP_024404830.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SUT-286
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1176919..1189072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6410_RS05920 (SUT286_11330)	ltrA	1177613..1178404 (-)	792	Protein_1135	group II intron reverse transcriptase/maturase	-
L6410_RS05925 (SUT286_11350)	-	1179263..1179481 (-)	219	WP_024404836.1	hypothetical protein	-
L6410_RS05930 (SUT286_11360)	-	1179490..1179705 (-)	216	WP_024404835.1	hypothetical protein	-
L6410_RS05935 (SUT286_11380)	-	1180338..1180946 (-)	609	WP_024404834.1	CPBP family intramembrane glutamic endopeptidase	-
L6410_RS05940 (SUT286_11390)	-	1180982..1181179 (-)	198	WP_237395090.1	hypothetical protein	-
L6410_RS05945 (SUT286_11400)	-	1181194..1181400 (-)	207	WP_024404832.1	hypothetical protein	-
L6410_RS05950 (SUT286_11410)	-	1181430..1181615 (-)	186	WP_024404831.1	hypothetical protein	-
L6410_RS05955 (SUT286_11420)	comA/nlmT	1181919..1184072 (+)	2154	WP_024404830.1	peptide cleavage/export ABC transporter	Regulator
L6410_RS05960	-	1184084..1185445 (+)	1362	Protein_1143	bacteriocin secretion accessory protein	-
L6410_RS05965 (SUT286_11450)	-	1185544..1185699 (+)	156	WP_237395091.1	ComC/BlpC family leader-containing pheromone/bacteriocin	-
L6410_RS05970 (SUT286_11460)	tnpA	1185908..1186372 (+)	465	WP_029172398.1	IS200/IS605-like element ISSsu4 family transposase	-
L6410_RS05975 (SUT286_11470)	-	1186508..1187854 (-)	1347	WP_237395092.1	GHKL domain-containing protein	-
L6410_RS05980 (SUT286_11480)	comE/blpR	1187865..1188605 (-)	741	WP_222381069.1	response regulator transcription factor	Regulator
L6410_RS05985 (SUT286_11490)	-	1188607..1188948 (-)	342	WP_222381070.1	LytR/AlgR family response regulator transcription factor	-

Sequence

Protein

• Length: 717 a.a.
• Molecular weight: 80548.46 Da
• Isoelectric Point: 7.1814

>NTDB_id=84479 L6410_RS05955 WP_024404830.1 1181919..1184072(+) (comA/nlmT) [Streptococcus parasuis strain SUT-286]
MTAYKRTFVPQIDARDCGVAALASIAKFYGSDYSLAHLRELAKTNKEGTTALGIVKAAKEMGFETRAIQADMSLFDMDDV
PYPFIVHVNKEGKLQHYYVVYHNKKDHLIIGDPDPTVKVTKMTKERFASEWTGVAIFLAPEPSYKPHKDKKNGLMSFLPL
IFRQRALIFYIVLASLLVTLINIGGSYYLQGILDEYIPNQMKSTLGIISIGLIITYILQQMMSFSRDYLLTVLSQRLSID
VILSYIRHIFELPMSFFATRRTGEVISRFTDANSIIDALASTILSLFLDVSILTIVGGVLLVQNTNLFLLSLISVPIYII
IIFAFMKPFEKMNNDVMQSNSMVSSAIIEDINGIETIKSLTSEESRYQKIDSEFVDYLDKSFKLSKYSILQTTLKQGAQL
ILNIVILWFGAQLVMNGHISVGQLITFNTLLSYFTNPLENIINLQTKLQSAKVANNRLNEVYLVESEFSNSQTLTDSQFL
TGDIRFEDLSYKYGFGRDTLSDINLTIKQGDKVSLVGISGSGKTTLAKMIVNFFEPYKGRITINNNDLKLIDKKTLRQHI
NYLPQQAYIFSGSILENLTLGANQLISQEDIIRACEIAEIRQDIEQMPMGYQTELSDGAGLSGGQKQRIALARALLTKAP
VLILDEATSGLDVLTEKKVIDNLMAMADKTIIFVAHRLSISERTNQVIVLDQGKVIETGSHHELMTKQGFYHHLFSK

Nucleotide

• Length: 2154 bp

>NTDB_id=84479 L6410_RS05955 WP_024404830.1 1181919..1184072(+) (comA/nlmT) [Streptococcus parasuis strain SUT-286]
ATGACAGCTTACAAACGAACTTTTGTTCCTCAAATCGATGCCAGAGACTGTGGTGTGGCTGCTTTAGCCTCTATTGCCAA
GTTTTATGGTTCTGATTATTCCCTAGCTCATTTGAGAGAATTGGCCAAAACCAATAAGGAAGGAACGACCGCACTTGGTA
TCGTCAAAGCAGCCAAAGAGATGGGCTTTGAAACTAGAGCCATCCAGGCTGACATGAGCCTCTTTGATATGGATGATGTT
CCCTATCCCTTCATCGTTCACGTCAATAAAGAAGGCAAACTGCAACACTACTATGTGGTCTATCACAACAAAAAAGACCA
CCTCATCATTGGTGATCCTGACCCTACTGTCAAAGTCACCAAGATGACCAAGGAGCGGTTTGCTTCTGAATGGACAGGCG
TCGCTATCTTTCTGGCTCCAGAACCCAGCTATAAGCCTCACAAAGATAAAAAGAACGGCCTGATGAGCTTTCTCCCTCTT
ATTTTCAGGCAACGTGCGCTTATCTTTTATATCGTCTTGGCTAGCCTTTTGGTGACGCTTATCAATATTGGTGGTTCTTA
CTACCTGCAAGGGATTTTGGATGAATACATTCCTAATCAAATGAAGTCAACCTTGGGGATTATCTCCATCGGCCTGATTA
TCACCTACATCCTCCAGCAGATGATGAGTTTCTCACGAGATTACCTTTTGACTGTGCTCAGCCAGCGGCTAAGTATTGAT
GTGATTCTTTCCTATATCCGTCATATCTTTGAACTGCCCATGTCCTTCTTCGCGACGCGGCGGACTGGTGAGGTTATCTC
TCGCTTTACAGATGCCAATTCAATCATTGATGCCCTGGCATCGACCATTTTGTCACTCTTCCTTGATGTCTCTATTTTGA
CCATCGTCGGTGGTGTGCTTTTGGTACAAAACACCAACCTCTTCCTGCTCTCCTTAATTTCAGTTCCCATTTACATCATC
ATTATTTTTGCTTTTATGAAGCCGTTTGAGAAGATGAATAACGATGTTATGCAGAGCAATTCCATGGTCAGCTCTGCCAT
TATCGAAGACATCAACGGCATTGAAACCATCAAATCCTTGACCAGCGAAGAAAGCCGCTACCAGAAGATTGATAGCGAGT
TCGTAGATTACCTGGACAAATCCTTCAAACTCAGTAAATACTCTATCCTGCAAACTACCCTTAAACAGGGAGCTCAGCTC
ATTCTAAATATTGTCATCTTGTGGTTTGGGGCTCAGCTAGTCATGAACGGACACATTTCAGTTGGACAACTGATCACCTT
CAACACCCTTCTATCTTATTTTACCAATCCTTTAGAAAATATTATAAACCTCCAAACCAAGCTCCAGTCTGCCAAGGTGG
CTAACAATCGCCTGAATGAAGTCTATCTGGTTGAGTCTGAATTCAGTAACAGTCAGACCTTAACAGATTCACAGTTCCTG
ACTGGCGATATTCGCTTTGAAGACCTTTCCTATAAGTACGGTTTCGGACGTGACACCCTATCGGATATCAATCTGACCAT
CAAACAAGGCGATAAGGTCAGTCTAGTGGGAATTAGCGGCTCAGGAAAGACAACCTTGGCCAAGATGATTGTCAATTTCT
TTGAGCCTTACAAGGGTCGAATCACCATCAACAACAATGACCTTAAACTAATTGATAAAAAGACGCTTCGGCAACACATT
AACTACCTCCCACAACAAGCTTATATCTTCAGTGGTTCAATCTTAGAAAACTTGACTTTAGGGGCTAATCAACTGATTAG
TCAGGAAGATATTATCAGAGCTTGTGAGATCGCTGAAATTCGACAAGATATCGAGCAGATGCCTATGGGCTATCAAACAG
AATTGTCTGACGGAGCTGGCTTATCGGGTGGTCAAAAGCAACGGATTGCTTTGGCTAGGGCTCTACTGACTAAAGCCCCT
GTTCTTATTCTTGATGAAGCCACTAGCGGCCTTGATGTGCTAACGGAGAAAAAGGTCATTGATAATTTAATGGCCATGGC
AGACAAGACCATTATCTTTGTCGCACACCGCCTCAGTATTTCTGAGCGAACCAACCAAGTTATCGTTCTTGACCAAGGGA
AGGTCATTGAGACTGGTTCACATCACGAATTGATGACCAAACAAGGTTTCTACCATCATCTATTTAGCAAGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (500-649)

• Peptidase C39 family (Peptidase_C39) (7-142)

• ABC transporter transmembrane region (ABC_membrane) (168-438)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	73.986	99.721	0.738
comA	Streptococcus mitis NCTC 12261	68.495	99.163	0.679
comA	Streptococcus mitis SK321	67.932	99.163	0.674
comA	Streptococcus pneumoniae Rx1	67.792	99.163	0.672
comA	Streptococcus pneumoniae D39	67.792	99.163	0.672
comA	Streptococcus pneumoniae R6	67.792	99.163	0.672
comA	Streptococcus pneumoniae TIGR4	67.511	99.163	0.669
comA	Streptococcus gordonii str. Challis substr. CH1	65.734	99.721	0.656