Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   F6I26_RS11050 Genome accession   NZ_CP126961
Coordinates   2144644..2145834 (+) Length   396 a.a.
NCBI ID   WP_024052475.1    Uniprot ID   -
Organism   Streptococcus anginosus strain UMB4708     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2139644..2150834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I26_RS11025 (F6I26_011025) comE 2141451..2142200 (-) 750 WP_024052478.1 competence system response regulator transcription factor ComE Regulator
  F6I26_RS11030 (F6I26_011030) comD/comD2 2142200..2143525 (-) 1326 WP_218969789.1 GHKL domain-containing protein Regulator
  F6I26_RS11035 (F6I26_011035) - 2143543..2143689 (-) 147 WP_003029519.1 bacteriocin -
  F6I26_RS11045 (F6I26_011045) rlmH 2143971..2144450 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  F6I26_RS11050 (F6I26_011050) htrA 2144644..2145834 (+) 1191 WP_024052475.1 trypsin-like peptidase domain-containing protein Regulator
  F6I26_RS11055 (F6I26_011055) spo0J 2145889..2146656 (+) 768 WP_070672281.1 ParB/RepB/Spo0J family partition protein Regulator
  F6I26_RS11060 (F6I26_011060) - 2146954..2148129 (+) 1176 WP_070811584.1 IS256-like element ISSag11 family transposase -

Sequence


Protein


Download         Length: 396 a.a.        Molecular weight: 41711.71 Da        Isoelectric Point: 9.4264

>NTDB_id=840816 F6I26_RS11050 WP_024052475.1 2144644..2145834(+) (htrA) [Streptococcus anginosus strain UMB4708]
MKNSSNFTKKLLLLFMVLAIGFIGGLLGNLTSSKLSTNSSTTTKVNQVTTAYKNTNSTTQAVSKVKDAVVSVITYANNNS
QNSVFGNDDSNNNNDNSQQVASEGSGVIYKKDGKYAYLVTNTHVISGAKKVDIRLADGNKVPGEIVGSDTYSDISVVRIS
ADKVKSVAEFGDSSKLTVGETAIAIGSPLGSNYANTVTQGIISSLNRNVSLKSEDGQTISTQAIQTDTAINPGNSGGPLV
NIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDVINIINQLEANGTVTRPALGIQMIDITNLSSSDLSRLKLPSKITSGV
VVRSAQSGMPAEGKLQKYDVITKVDDKEIFSTSDLQSALYKHSIGDNIKITFYRDGKETTTTIKLTKSTKDLDSNN

Nucleotide


Download         Length: 1191 bp        

>NTDB_id=840816 F6I26_RS11050 WP_024052475.1 2144644..2145834(+) (htrA) [Streptococcus anginosus strain UMB4708]
ATGAAAAACTCTTCAAATTTCACAAAAAAATTGTTATTGCTTTTCATGGTCTTAGCTATAGGTTTTATCGGTGGTTTACT
TGGAAACTTAACTTCATCTAAATTATCAACAAATAGCTCTACAACGACTAAAGTTAATCAAGTTACTACTGCTTATAAAA
ATACAAATTCCACAACACAAGCTGTGAGTAAAGTGAAAGATGCTGTGGTATCCGTTATTACCTATGCTAATAATAATTCA
CAAAACAGCGTGTTTGGAAATGATGATTCAAATAATAACAATGATAATTCTCAACAAGTAGCTAGCGAAGGATCTGGGGT
TATTTATAAAAAAGATGGAAAATACGCTTACTTAGTAACCAATACTCACGTTATCAGTGGTGCTAAAAAAGTTGACATTC
GTTTAGCAGATGGTAATAAAGTTCCTGGAGAAATTGTAGGGTCAGATACTTATTCTGATATCTCCGTTGTTCGAATTAGT
GCTGATAAAGTAAAATCAGTTGCTGAATTTGGAGATTCTAGTAAATTGACGGTTGGTGAGACAGCTATTGCGATTGGAAG
TCCGCTCGGATCAAATTACGCTAACACTGTGACGCAAGGAATTATTTCTAGTTTAAATCGTAATGTTTCTTTAAAATCTG
AAGACGGACAAACGATTTCAACACAAGCTATTCAAACAGACACAGCTATTAACCCAGGGAACTCTGGTGGACCACTTGTG
AATATCCAAGGACAAGTAATTGGTATTACTTCAAGTAAAATAGCTAGCAACGGCGGAACTTCGGTTGAAGGATTAGGATT
TGCTATTCCATCTAATGATGTTATAAACATTATTAACCAGTTAGAAGCAAATGGAACTGTTACACGACCAGCTCTAGGAA
TCCAAATGATTGACATCACTAATCTGTCTAGTTCAGATCTATCACGCTTAAAACTTCCATCAAAAATAACTAGTGGAGTT
GTCGTACGTTCAGCTCAATCTGGAATGCCAGCTGAAGGAAAACTTCAAAAATATGATGTGATTACAAAAGTAGATGATAA
AGAAATTTTTTCAACAAGTGATTTACAATCCGCTTTATACAAACATTCAATTGGTGACAACATAAAAATCACTTTCTATC
GTGATGGAAAAGAAACTACTACTACCATTAAGCTTACAAAATCTACAAAAGATTTAGATTCAAATAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

75.312

100

0.763

  htrA Streptococcus mitis NCTC 12261

72.544

100

0.727

  htrA Streptococcus pneumoniae Rx1

72.292

100

0.725

  htrA Streptococcus pneumoniae D39

72.292

100

0.725

  htrA Streptococcus pneumoniae R6

72.292

100

0.725

  htrA Streptococcus pneumoniae TIGR4

72.292

100

0.725

  htrA Streptococcus mutans UA159

55.471

99.242

0.551