Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   QNH31_RS16035 Genome accession   NZ_CP126094
Coordinates   3095218..3095862 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus subtilis strain G2S2     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3090218..3100862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH31_RS16000 (QNH31_16000) mrpB 3091410..3091841 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  QNH31_RS16005 (QNH31_16005) mrpC 3091841..3092182 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  QNH31_RS16010 (QNH31_16010) mrpD 3092175..3093656 (+) 1482 WP_041850587.1 Na+/H+ antiporter subunit D -
  QNH31_RS16015 (QNH31_16015) mrpE 3093662..3094138 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  QNH31_RS16020 (QNH31_16020) mrpF 3094138..3094422 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  QNH31_RS16025 (QNH31_16025) mnhG 3094406..3094780 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  QNH31_RS16030 (QNH31_16030) yuxO 3094819..3095199 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  QNH31_RS16035 (QNH31_16035) comA 3095218..3095862 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QNH31_RS16040 (QNH31_16040) comP 3095943..3098243 (-) 2301 WP_041850586.1 histidine kinase Regulator
  QNH31_RS16045 (QNH31_16045) comX 3098255..3098419 (-) 165 WP_015384519.1 competence pheromone ComX -
  QNH31_RS16050 (QNH31_16050) - 3098432..3099292 (-) 861 WP_041850585.1 polyprenyl synthetase family protein -
  QNH31_RS16055 (QNH31_16055) degQ 3099476..3099616 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QNH31_RS16060 (QNH31_16060) - 3099838..3099900 (+) 63 Protein_3094 hypothetical protein -
  QNH31_RS16065 (QNH31_16065) - 3100079..3100447 (+) 369 WP_041850584.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=835564 QNH31_RS16035 WP_003220716.1 3095218..3095862(-) (comA) [Bacillus subtilis strain G2S2]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=835564 QNH31_RS16035 WP_003220716.1 3095218..3095862(-) (comA) [Bacillus subtilis strain G2S2]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATTTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1