Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   H7675_RS04835 Genome accession   NZ_AP023389
Coordinates   946141..946977 (-) Length   278 a.a.
NCBI ID   WP_031488274.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain KUN-0012590     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 941141..951977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7675_RS04815 (KUN2590_08970) - 941381..942373 (-) 993 WP_031488271.1 D-lactate dehydrogenase -
  H7675_RS04820 (KUN2590_08980) - 942388..942933 (-) 546 Protein_900 PTS sugar transporter subunit IIC -
  H7675_RS04825 - 942973..943830 (+) 858 Protein_901 LysR family transcriptional regulator -
  H7675_RS04830 (KUN2590_09000) topA 943905..946034 (-) 2130 WP_011017773.1 type I DNA topoisomerase -
  H7675_RS04835 (KUN2590_09010) dprA 946141..946977 (-) 837 WP_031488274.1 DNA-processing protein DprA Machinery gene
  H7675_RS04840 (KUN2590_09020) - 947042..947833 (-) 792 WP_031488275.1 ribonuclease HII -
  H7675_RS04845 (KUN2590_09030) ylqF 947823..948671 (-) 849 WP_031488276.1 ribosome biogenesis GTPase YlqF -
  H7675_RS04850 (KUN2590_09040) - 948890..949330 (+) 441 WP_031488277.1 DUF1836 domain-containing protein -
  H7675_RS04855 (KUN2590_09050) trhA 949327..949977 (+) 651 WP_002984629.1 PAQR family membrane homeostasis protein TrhA -
  H7675_RS04860 (KUN2590_09060) - 950094..951005 (+) 912 WP_031488278.1 diacylglycerol/lipid kinase family protein -
  H7675_RS04865 (KUN2590_09070) - 951055..951492 (-) 438 WP_031488279.1 hypothetical protein -

Sequence


Protein


Download         Length: 278 a.a.        Molecular weight: 30960.96 Da        Isoelectric Point: 9.2511

>NTDB_id=82793 H7675_RS04835 WP_031488274.1 946141..946977(-) (dprA) [Streptococcus pyogenes strain KUN-0012590]
MNHFELYKLKKAGLTNKNILNILDYQKQQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQKLKIEFKQFPSISILDKHYP
MALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI
AIIGTGLDRFYPKENRELQTFLGKNHLVITEYGPGEEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR
DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY

Nucleotide


Download         Length: 837 bp        

>NTDB_id=82793 H7675_RS04835 WP_031488274.1 946141..946977(-) (dprA) [Streptococcus pyogenes strain KUN-0012590]
GTGAATCATTTTGAACTTTATAAGCTAAAGAAAGCTGGACTGACTAATAAAAACATTCTCAATATTCTTGACTACCAAAA
ACAACAGGAAAAATCGTTGTCACTTCGAGATATGGCCGTTGTTTCTGGCTGTAAGCATCCGTCTCACTTTATAGAAGCCT
ATAAGCAGTTAGATATTCAAAAATTAAAAATAGAATTTAAACAATTTCCTAGTATTTCTATCTTAGATAAGCATTACCCA
ATGGCATTGAAAGAAATATACAATCCACCTGTCCTCTTGTTTTTTCAGGGAAATTTAGACCTTCTTGAGAAACCTAAATT
AGCCATTGTCGGCTCCAGACGCTCAAGCGATACCGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT
TTGTGATTGTTAGCGGACTTGCTCGAGGTATCGACACTAGTGCTCATTTAGCCTGCCTTAAAAATGGGGGACAAACCATC
GCTATTATTGGAACAGGGTTGGATCGCTTTTACCCTAAAGAAAATAGGGAGTTGCAAACTTTCTTAGGGAAAAATCATCT
TGTGATAACAGAATACGGTCCAGGAGAAGAAGCTTTATCTTATCACTTTCCAGAACGGAATCGTATTATCGCAGGCCTTA
GCCGAGGTATTCTTGTCGTTGAAGCAAAAAATCGTTCAGGTTCCTTGATTACTTGTCAAATTGGGATAGAAGAAGGCCGA
GACATTTTTGCTGTCCCAGGAAACATTTTGGACGGGAAATCCGAAGGTTGCCTTCAGTTAATTAAAGAGGGAGCAACATG
CGTCACATCGGGCATGGATATCCTTTCAGAGTACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Streptococcus mutans UA159

66.906

100

0.669

  dprA/cilB/dalA Streptococcus pneumoniae Rx1

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae D39

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae R6

60.072

100

0.601

  dprA/cilB/dalA Streptococcus pneumoniae TIGR4

60.072

100

0.601

  dprA/cilB/dalA Streptococcus mitis SK321

60.072

100

0.601

  dprA/cilB/dalA Streptococcus mitis NCTC 12261

59.712

100

0.597

  dprA Lactococcus lactis subsp. cremoris KW2

57.194

100

0.572

  dprA Legionella pneumophila strain ERS1305867

42.437

85.612

0.363


Multiple sequence alignment